RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 REV1Q9UBZ9 1251 aa6.99□□□□□ -1.29
ATXN3-233ENST00000555816 SORBS3O60504 671 aa6.98□□□□□ -1.29
ATXN3-233ENST00000555816 LINC00310P59036 64 aa6.98□□□□□ -1.29
ATXN3-233ENST00000555816 CHMP4BP1P59074 171 aa6.98□□□□□ -1.29
ATXN3-233ENST00000555816 CLEC16AQ2KHT3 1053 aa6.98□□□□□ -1.29
ATXN3-233ENST00000555816 RNF111Q6ZNA4 994 aa6.98□□□□□ -1.29
ATXN3-233ENST00000555816 BAHD1Q8TBE0 780 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-233ENST00000555816 LINC01599Q8WXQ3 324 aa6.98□□□□□ -1.29
ATXN3-233ENST00000555816 TEX51A0A1B0GUA7 166 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 HRKO00198 91 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 NUAK1O60285 661 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 HTR3BO95264 441 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 HSPA6P17066 643 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 GBP2P32456 591 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-233ENST00000555816 RNF4P78317 190 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 DLG4P78352 724 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 TEKQ02763 1124 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 DAGLBQ8NCG7 672 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 SYTL5Q8TDW5 730 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-233ENST00000555816 VWCEQ96DN2 955 aa6.97□□□□□ -1.29
ATXN3-233ENST00000555816 INTS4Q96HW7 963 aaKnown RBP6.97□□□□□ -1.29
ATXN3-233ENST00000555816 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-233ENST00000555816 CCDC7Q96M83 1385 aa6.96□□□□□ -1.29
ATXN3-233ENST00000555816 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 RGS13O14921 159 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 GBP1P32455 592 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 TRHRP34981 398 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-233ENST00000555816 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 PHACTR4Q8IZ21 702 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 MCOLN1Q9GZU1 580 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 KCNK12Q9HB15 430 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 MRS2Q9HD23 443 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 UTRNP46939 3433 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 CRYBG1Q9Y4K1 1723 aa6.96□□□□□ -1.3
ATXN3-233ENST00000555816 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 USP6P35125 1406 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 PPIP5K1Q6PFW1 1433 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 LRRN2O75325 713 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 IL2RBP14784 551 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 KIR2DL1P43626 348 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-233ENST00000555816 KIR2DL2P43627 348 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-233ENST00000555816 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-233ENST00000555816 REC114Q7Z4M0 266 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 CRTAC1Q9NQ79 661 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 KLHL3Q9UH77 587 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 LMO7Q8WWI1 1683 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 PARP4Q9UKK3 1724 aaKnown RBP6.95□□□□□ -1.3
ATXN3-233ENST00000555816 TTC21BQ7Z4L5 1316 aa6.95□□□□□ -1.3
ATXN3-233ENST00000555816 CENPJQ9HC77 1338 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-233ENST00000555816 MYOM1P52179 1685 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 PEAK1Q9H792 1746 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 TIGD5Q53EQ6 642 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 SNAP47Q5SQN1 464 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 FBXO33Q7Z6M2 555 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 TMEM151BQ8IW70 566 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 ZNF655Q8N720 491 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-233ENST00000555816 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 GPR160Q9UJ42 338 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-233ENST00000555816 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
ATXN3-233ENST00000555816 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
ATXN3-233ENST00000555816 OR14I1A6ND48 311 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 PRRG2O14669 202 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 ATE1O95260 518 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
ATXN3-233ENST00000555816 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
ATXN3-233ENST00000555816 PDE6BP35913 854 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 CCNFP41002 786 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 NMIQ13287 307 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-233ENST00000555816 CWF19L2Q2TBE0 894 aaKnown RBP6.93□□□□□ -1.3
ATXN3-233ENST00000555816 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 GOLM1Q8NBJ4 401 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 KIF2CQ99661 725 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 LRRC3Q9BY71 257 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 TTC21AQ8NDW8 1320 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ATXN3-233ENST00000555816 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-233ENST00000555816 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 SLC22A31A6NKX4 558 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 RFXAPO00287 272 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 PCBP3P57721 371 aaKnown RBP6.92□□□□□ -1.3
ATXN3-233ENST00000555816 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 CNOT6Q9ULM6 557 aaKnown RBP6.92□□□□□ -1.3
ATXN3-233ENST00000555816 NCANO14594 1321 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
ATXN3-233ENST00000555816 CPSF1Q10570 1443 aaKnown RBP6.92□□□□□ -1.3
ATXN3-233ENST00000555816 SHISA3A0PJX4 238 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 B8ZZF3 427 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 NRDCO43847 1150 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms