RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ORC3Q9UBD5 711 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 FEM1BQ9UK73 627 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 GRXCR1A8MXD5 290 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 DEXIO95424 95 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 CLTBP09497 229 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 ADCYAP1R1P41586 468 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 PKN1Q16512 942 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 FAM160B2Q86V87 743 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 SLF1Q9BQI6 1058 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 TANGO6Q9C0B7 1094 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 PRR12Q9ULL5 1215 aa13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-211ENST00000555709 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 FAM86C2PA6NEL3 165 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 RAG1P15918 1043 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 IGFBP4P22692 258 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 PFKFB3Q16875 520 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 CATSPERGQ6ZRH7 1159 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 NPLOC4Q8TAT6 608 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 CHURC1Q8WUH1 139 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 AIFM3Q96NN9 605 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 PIGSQ96S52 555 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.52□□□□□ -0.257e-6■□□□□ 9.4
MTHFD1-211ENST00000555709 CWC22Q9HCG8 908 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-211ENST00000555709 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 PPP1R11O60927 126 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 CNMDO75829 334 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 FLOT1O75955 427 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 SCG2P13521 617 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 PTPREP23469 700 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 AAK1Q2M2I8 961 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 ANO1Q5XXA6 986 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 C16orf59Q7L2K0 433 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 TRANK1O15050 2925 aa13.51□□□□□ -0.25
MTHFD1-211ENST00000555709 SPDYE16A6NNV3 312 aaPredicted RBP13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 ZBTB5O15062 677 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 GRB14Q14449 540 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 LRRC41Q15345 812 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 FAM184AQ8NB25 1140 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 GTF3C2Q8WUA4 911 aaPredicted RBP13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 PIBF1Q8WXW3 757 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 WASF1Q92558 559 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 KIFC2Q96AC6 838 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 VAT1LQ9HCJ6 419 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 SEC63Q9UGP8 760 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 SMCHD1A6NHR9 2005 aa13.5□□□□□ -0.25
MTHFD1-211ENST00000555709 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 STXBP3O00186 592 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 SEPT4O43236 478 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 PDCP20941 246 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 SYT1P21579 422 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 DSG3P32926 999 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 COG2Q14746 738 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 TYW1BQ6NUM6 668 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 ZNF713Q8N859 430 aaPredicted RBP13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 REPS2Q8NFH8 660 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 ATG4CQ96DT6 458 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 SLC38A10Q9HBR0 1119 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
MTHFD1-211ENST00000555709 LRRC37A2A6NM11 1700 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 ZNF536O15090 1300 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 WDFY4Q6ZS81 3184 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms