RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 SLC45A1Q9Y2W3 748 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 RABGAP1Q9Y3P9 1069 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
SRP54-208ENST00000555557 NEMFO60524 1076 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 USP11P51784 963 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 ERVK-24P63145 666 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 GHRHRQ02643 423 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 KLHL40Q2TBA0 621 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 TKFCQ3LXA3 575 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 MCTP2Q6DN12 878 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 SHC4Q6S5L8 630 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 JMYQ8N9B5 988 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 GJA10Q969M2 543 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 GZF1Q9H116 711 aaPredicted RBP11.59□□□□□ -0.55
SRP54-208ENST00000555557 CYP39A1Q9NYL5 469 aa11.59□□□□□ -0.55
SRP54-208ENST00000555557 DDX25Q9UHL0 483 aaKnown RBP11.59□□□□□ -0.55
SRP54-208ENST00000555557 SRPRBQ9Y5M8 271 aaKnown RBP11.59□□□□□ -0.55
SRP54-208ENST00000555557 VWA3AA6NCI4 1184 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 FAM86B1E9PN63 330 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 BMP15O95972 392 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 FAM86B2P0C5J1 330 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 EIF2AK2P19525 551 aaKnown RBP11.58□□□□□ -0.55
SRP54-208ENST00000555557 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.55
SRP54-208ENST00000555557 WDR78Q5VTH9 848 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 PPP4R3AQ6IN85 833 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.55
SRP54-208ENST00000555557 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 FSIP1Q8NA03 581 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 CHST13Q8NET6 341 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 CSRNP2Q9H175 543 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 PORCNQ9H237 461 aa11.58□□□□□ -0.55
SRP54-208ENST00000555557 CUTAO60888 179 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 MBD3O95983 291 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 ZNF76P36508 570 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 APLP1P51693 650 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 PRR16Q569H4 304 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 USP49Q70CQ1 688 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 GPRC5AQ8NFJ5 357 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 IL31RAQ8NI17 732 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 RMDN3Q96TC7 470 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 PARK7Q99497 189 aaKnown RBP11.58□□□□□ -0.56
SRP54-208ENST00000555557 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
SRP54-208ENST00000555557 MAP3K20Q9NYL2 800 aaKnown RBP11.58□□□□□ -0.56
SRP54-208ENST00000555557 PCNTO95613 3336 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 A0A1W2PQ27 194 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 A0A1W2PQ64 194 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 A0A1W2PQD8 194 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 NR1I2O75469 434 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 ECM2O94769 699 aaPredicted RBP11.57□□□□□ -0.56
SRP54-208ENST00000555557 SLC25A27O95847 323 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 OR52Z1P0C646 297 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 CDC25AP30304 524 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 TXKP42681 527 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 NDUFA8P51970 172 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 CALCRLQ16602 461 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 TEX2Q8IWB9 1127 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 MRPS27Q92552 414 aaKnown RBP11.57□□□□□ -0.56
SRP54-208ENST00000555557 HHIPL1Q96JK4 782 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 DACT1Q9NYF0 836 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 TMEM63CQ9P1W3 806 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
SRP54-208ENST00000555557 CYP3A7-CYP3A51PA0A087WV96 503 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 AOC2O75106 756 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 CYP3A4P08684 503 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 MYCLP12524 364 aaPredicted RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 CMA1P23946 247 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 CYP3A7P24462 503 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 TECP42680 631 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 TAF1CQ15572 869 aaPredicted RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 DEFB115Q30KQ5 88 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 ARHGEF16Q5VV41 709 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 ARL6IP4Q66PJ3 421 aaKnown RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 SAMD3Q8N6K7 520 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 GTF3C2Q8WUA4 911 aaPredicted RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 HAS1Q92839 578 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 FERMT2Q96AC1 680 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 LENG9Q96B70 501 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 MTMR9Q96QG7 549 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 PANK2Q9BZ23 570 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 EHMT1Q9H9B1 1298 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 FBXO40Q9UH90 709 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 A0A0G2JMZ2 1700 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 PGK2P07205 417 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 PFKFB1P16118 471 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 CIITAP33076 1130 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 GCLCP48506 637 aaPredicted RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 INHBEP58166 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms