RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 TRAF1Q13077 416 aa22.6■■□□□ 1.21
CBLN3-202ENST00000555436 ITGA7Q13683 1181 aa22.6■■□□□ 1.21
CBLN3-202ENST00000555436 HOMER1Q86YM7 354 aa22.6■■□□□ 1.21
CBLN3-202ENST00000555436 OR6J1Q8NGC5 347 aa22.6■■□□□ 1.21
CBLN3-202ENST00000555436 LY9Q9HBG7 655 aa22.6■■□□□ 1.21
CBLN3-202ENST00000555436 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
CBLN3-202ENST00000555436 PRC1O43663 620 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 CYTH3O43739 400 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 CFBP00751 764 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 TXNP10599 105 aaKnown RBP22.59■■□□□ 1.21
CBLN3-202ENST00000555436 EPHB4P54760 987 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 TTLL4Q14679 1199 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 NECTIN1Q15223 517 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 CREB3L3Q68CJ9 461 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 CASC1Q6TDU7 716 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 DEFB123Q8N688 67 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 PIGSQ96S52 555 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 MAP3K14Q99558 947 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 POLR3EQ9NVU0 708 aa22.59■■□□□ 1.21
CBLN3-202ENST00000555436 MAP3K20Q9NYL2 800 aaKnown RBP22.59■■□□□ 1.21
CBLN3-202ENST00000555436 PNMA6FA0A0J9YX94 578 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 DDAH1O94760 285 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 MCM5P33992 734 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 PSMC6P62333 389 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 PURAQ00577 322 aaKnown RBP22.58■■□□□ 1.21
CBLN3-202ENST00000555436 STXBP2Q15833 593 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 BRDTQ58F21 947 aaPredicted RBP22.58■■□□□ 1.21
CBLN3-202ENST00000555436 ARHGEF16Q5VV41 709 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 SAMD3Q8N6K7 520 aa22.58■■□□□ 1.21
CBLN3-202ENST00000555436 GPHNQ9NQX3 736 aaPredicted RBP22.58■■□□□ 1.21
CBLN3-202ENST00000555436 A6NJR5 290 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 ARIH2O95376 493 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 MFSD5Q6N075 450 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 CCDC62Q6P9F0 684 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 Q7L0L9 218 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 ZNF654Q8IZM8 581 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 TMTC2Q8N394 836 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 COPS5Q92905 334 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 TMEM87BQ96K49 555 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 PXMP2Q9NR77 195 aa22.57■■□□□ 1.2
CBLN3-202ENST00000555436 SH2B2O14492 632 aaPredicted RBP22.56■■□□□ 1.2
CBLN3-202ENST00000555436 MYL3P08590 195 aa22.56■■□□□ 1.2
CBLN3-202ENST00000555436 EIF2AK2P19525 551 aaKnown RBP22.56■■□□□ 1.2
CBLN3-202ENST00000555436 KIF5BP33176 963 aa22.56■■□□□ 1.2
CBLN3-202ENST00000555436 SEPT14Q6ZU15 432 aa22.56■■□□□ 1.2
CBLN3-202ENST00000555436 CTCFLQ8NI51 663 aaPredicted RBP22.56■■□□□ 1.2
CBLN3-202ENST00000555436 KPNA6O60684 536 aa22.55■■□□□ 1.2
CBLN3-202ENST00000555436 EIF3JO75822 258 aaKnown RBP22.55■■□□□ 1.2
CBLN3-202ENST00000555436 NR3C2P08235 984 aa22.55■■□□□ 1.2
CBLN3-202ENST00000555436 COL9A3Q14050 684 aaPredicted RBP22.55■■□□□ 1.2
CBLN3-202ENST00000555436 FAM109BQ6ICB4 259 aaPredicted RBP22.55■■□□□ 1.2
CBLN3-202ENST00000555436 MTG1Q9BT17 334 aaPredicted RBP22.55■■□□□ 1.2
CBLN3-202ENST00000555436 MYL10Q9BUA6 226 aa22.55■■□□□ 1.2
CBLN3-202ENST00000555436 SMARCA1P28370 1054 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 HOXA13P31271 388 aaPredicted RBP22.54■■□□□ 1.2
CBLN3-202ENST00000555436 LIFRP42702 1097 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 PPIGQ13427 754 aaKnown RBP eCLIP22.54■■□□□ 1.2
CBLN3-202ENST00000555436 RNF20Q5VTR2 975 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 NFXL1Q6ZNB6 911 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 TMEM199Q8N511 208 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 RNPC3Q96LT9 517 aaKnown RBP22.54■■□□□ 1.2
CBLN3-202ENST00000555436 PDCD2LQ9BRP1 358 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 SPZ1Q9BXG8 430 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 PPP1R12CQ9BZL4 782 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 TRPV6Q9H1D0 765 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 ALDH8A1Q9H2A2 487 aaPredicted RBP22.54■■□□□ 1.2
CBLN3-202ENST00000555436 MTMR10Q9NXD2 777 aa22.54■■□□□ 1.2
CBLN3-202ENST00000555436 CCDC69A6NI79 296 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 GCOM1H8Y6P7 765 aaPredicted RBP22.53■■□□□ 1.2
CBLN3-202ENST00000555436 B4GALT4O60513 344 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 CDC45O75419 566 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 GH1P01241 217 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 POLR2MP0CAP2 368 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 LY6KQ17RY6 165 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 CCDC136Q96JN2 1154 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 LZTS2Q9BRK4 669 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 HIPK3Q9H422 1215 aa22.53■■□□□ 1.2
CBLN3-202ENST00000555436 CSF2RAP15509 400 aa22.52■■□□□ 1.2
CBLN3-202ENST00000555436 CYP2C18P33260 490 aa22.52■■□□□ 1.2
CBLN3-202ENST00000555436 SMAD3P84022 425 aaKnown RBP22.52■■□□□ 1.2
CBLN3-202ENST00000555436 DDX41Q9UJV9 622 aaKnown RBP22.52■■□□□ 1.2
CBLN3-202ENST00000555436 LAMA2P24043 3122 aaKnown RBP22.51■■□□□ 1.19
CBLN3-202ENST00000555436 CALM1P0DP23 149 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 CALM2P0DP24 149 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 CALM3P0DP25 149 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 GNAQP50148 359 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 ARHGAP1Q07960 439 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 C16orf59Q7L2K0 433 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 VSIG10LQ86VR7 867 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 AFG1LQ8WV93 481 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 PIBF1Q8WXW3 757 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 RRP36Q96EU6 259 aaKnown RBP22.51■■□□□ 1.19
CBLN3-202ENST00000555436 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.51■■□□□ 1.19
CBLN3-202ENST00000555436 NOC4LQ9BVI4 516 aaKnown RBP22.51■■□□□ 1.19
CBLN3-202ENST00000555436 MYH6P13533 1939 aa22.51■■□□□ 1.19
CBLN3-202ENST00000555436 SUPT20HL2P0C7V6 817 aa22.5■■□□□ 1.19
CBLN3-202ENST00000555436 MYCLP12524 364 aaPredicted RBP22.5■■□□□ 1.19
CBLN3-202ENST00000555436 PGM5Q15124 567 aa22.5■■□□□ 1.19
CBLN3-202ENST00000555436 NBPF20Q3BBV1 942 aa22.5■■□□□ 1.19
CBLN3-202ENST00000555436 NFRKBQ6P4R8 1299 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms