RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SYNGAP1Q96PV0 1343 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 ASB14A6NK59 587 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 PDIA4P13667 645 aaKnown RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 TRIM29Q14134 588 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 UBE2SQ16763 222 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 LARP1BQ659C4 914 aaKnown RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 FBXO46Q6PJ61 603 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 FCHSD1Q86WN1 690 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 REXO1Q8N1G1 1221 aaKnown RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 RAET1EQ8TD07 263 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 CRYGNQ8WXF5 182 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 TINF2Q9BSI4 451 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 PXMP2Q9NR77 195 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 FLRT1Q9NZU1 646 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 BIN2Q9UBW5 565 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 PCDHA6Q9UN73 950 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 RBM19Q9Y4C8 960 aaKnown RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 PCDHA8Q9Y5H6 950 aa14.53□□□□□ -0.08
SYNE2-219ENST00000555323 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.08
SYNE2-219ENST00000555323 SPDYE3A6NKU9 549 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 B4DLN1 442 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 ADCY3O60266 1144 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 PDCP20941 246 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 CCL14Q16627 93 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 ARHGEF16Q5VV41 709 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 VSIG10LQ86VR7 867 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 TRIB2Q92519 343 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 TNFRSF25Q93038 417 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 PDCD2LQ9BRP1 358 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 PTCH2Q9Y6C5 1203 aa14.52□□□□□ -0.09
SYNE2-219ENST00000555323 SNAI1O95863 264 aaPredicted RBP14.51□□□□□ -0.09
SYNE2-219ENST00000555323 HSP90AA1P07900 732 aaKnown RBP14.51□□□□□ -0.09
SYNE2-219ENST00000555323 NR3C2P08235 984 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 GRK4P32298 578 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 KRT2P35908 639 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 SREBF1P36956 1147 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 PGM5Q15124 567 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 JAKMIP3Q5VZ66 844 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 XRRA1Q6P2D8 792 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 DIS3L2Q8IYB7 885 aaKnown RBP14.51□□□□□ -0.09
SYNE2-219ENST00000555323 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 MPHOSPH6Q99547 160 aaKnown RBP14.51□□□□□ -0.09
SYNE2-219ENST00000555323 ANO3Q9BYT9 981 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 FOXP1Q9H334 677 aaPredicted RBP14.51□□□□□ -0.09
SYNE2-219ENST00000555323 BRMS1Q9HCU9 246 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
SYNE2-219ENST00000555323 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 CYP3A4P08684 503 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 SYT1P21579 422 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 U2AF2P26368 475 aaKnown RBP eCLIP14.5□□□□□ -0.09
SYNE2-219ENST00000555323 ANP32AP39687 249 aaKnown RBP14.5□□□□□ -0.09
SYNE2-219ENST00000555323 GUCY1B3Q02153 619 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 SAFBQ15424 915 aaKnown RBP eCLIP14.5□□□□□ -0.09
SYNE2-219ENST00000555323 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 MFSD14CQ5VZR4 134 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 PCNX4Q63HM2 1172 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 ARMCX2Q7L311 632 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 KRT25Q7Z3Z0 450 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 RASGRP4Q8TDF6 673 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 KATNBL1Q9H079 304 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 ABHD16BQ9H3Z7 469 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 EHMT1Q9H9B1 1298 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
SYNE2-219ENST00000555323 EDIL3O43854 480 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 EIF3JO75822 258 aaKnown RBP14.49□□□□□ -0.09
SYNE2-219ENST00000555323 STAM2O75886 525 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 HMGCRP04035 888 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 ELNP15502 786 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 EIF2AK2P19525 551 aaKnown RBP14.49□□□□□ -0.09
SYNE2-219ENST00000555323 CYP2C19P33261 490 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 USP11P51784 963 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 MRPS9P82933 396 aaKnown RBP14.49□□□□□ -0.09
SYNE2-219ENST00000555323 NR5A1Q13285 461 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 STXBP2Q15833 593 aa14.49□□□□□ -0.09
SYNE2-219ENST00000555323 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.49□□□□□ -0.09
SYNE2-219ENST00000555323 H3BQV1 296 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-219ENST00000555323 CIITAP33076 1130 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 ARHGAP4P98171 946 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 CACNB2Q08289 660 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-219ENST00000555323 PDE4DQ08499 809 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 ACVR2BQ13705 512 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 EARS2Q5JPH6 523 aaKnown RBP14.48□□□□□ -0.09
SYNE2-219ENST00000555323 IFFO2Q5TF58 517 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 PGBD1Q96JS3 809 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 VTA1Q9NP79 307 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 LCTP09848 1927 aa14.48□□□□□ -0.09
SYNE2-219ENST00000555323 CCDC194A0A1B0GVG4 234 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 RBM47A0AV96 593 aaKnown RBP14.47□□□□□ -0.09
SYNE2-219ENST00000555323 MAFGO15525 162 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 STX6O43752 255 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 CYBAP13498 195 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 CCND2P30279 289 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 FOSBP53539 338 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 TRIM32Q13049 653 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 NONOQ15233 471 aaKnown RBP eCLIP14.47□□□□□ -0.09
SYNE2-219ENST00000555323 TAPT1Q6NXT6 567 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 IL31RAQ8NI17 732 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms