RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 APPBP2Q92624 585 aa15.64■□□□□ 0.09
TUBB3-207ENST00000554927 SUGCTQ9HAC7 445 aa15.64■□□□□ 0.09
TUBB3-207ENST00000554927 COL4A4P53420 1690 aaPredicted RBP15.63■□□□□ 0.09
TUBB3-207ENST00000554927 RNF113AO15541 343 aaKnown RBP15.63■□□□□ 0.09
TUBB3-207ENST00000554927 PLA2G6O60733 806 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 ICAM1P05362 532 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 IL9P15248 144 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 CALML3P27482 149 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 PDE4DQ08499 809 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 PPP4R3BQ5MIZ7 849 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 FAM117BQ6P1L5 589 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.63■□□□□ 0.09
TUBB3-207ENST00000554927 MPHOSPH6Q99547 160 aaKnown RBP15.63■□□□□ 0.09
TUBB3-207ENST00000554927 RAD9AQ99638 391 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 NACAP1Q9BZK3 213 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 TTC41PQ6P2S7 1318 aa15.63■□□□□ 0.09
TUBB3-207ENST00000554927 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.62■□□□□ 0.09
TUBB3-207ENST00000554927 RBM47A0AV96 593 aaKnown RBP15.62■□□□□ 0.09
TUBB3-207ENST00000554927 NKRFO15226 690 aaKnown RBP eCLIP15.62■□□□□ 0.095e-7■□□□□ 10.7
TUBB3-207ENST00000554927 ERVK-21P61565 698 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 NHLH1Q02575 133 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 LRRC8DQ7L1W4 858 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 RASGRP2Q7LDG7 609 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 IFNL3Q8IZI9 196 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 CAGE1Q8TC20 777 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 AFAP1L1Q8TED9 768 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 COPS5Q92905 334 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 PCDHB15Q9Y5E8 787 aa15.62■□□□□ 0.09
TUBB3-207ENST00000554927 MYH7P12883 1935 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 A6NJR5 290 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 TSPY2A6NKD2 308 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 PATL2C9JE40 543 aaKnown RBP15.61■□□□□ 0.09
TUBB3-207ENST00000554927 M0R2C6 588 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 NFIBO00712 420 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 GJB5O95377 273 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 TXNP10599 105 aaKnown RBP15.61■□□□□ 0.09
TUBB3-207ENST00000554927 SELPP16109 830 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 CNKSR3Q6P9H4 555 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 SLC30A10Q6XR72 485 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 EP400NLQ6ZTU2 488 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 SCFD2Q8WU76 684 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 BRWD1Q9NSI6 2320 aa15.61■□□□□ 0.09
TUBB3-207ENST00000554927 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 LINC01553A4QN01 128 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 DCXO43602 365 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 SLC16A2P36021 539 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 PPARAQ07869 468 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
TUBB3-207ENST00000554927 TSHZ3Q63HK5 1081 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 FBXO22Q8NEZ5 403 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 FBXL18Q96ME1 805 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 YTHDC1Q96MU7 727 aaKnown RBP15.6■□□□□ 0.09
TUBB3-207ENST00000554927 NAPBQ9H115 298 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 TANC1Q9C0D5 1861 aa15.6■□□□□ 0.09
TUBB3-207ENST00000554927 ABHD14A-ACY1A0A1B0GW23 586 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 GRXCR2A6NFK2 248 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 H3BQ06 376 aaPredicted RBP15.59■□□□□ 0.09
TUBB3-207ENST00000554927 NMT2O60551 498 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 IKBKEQ14164 716 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 PUS10Q3MIT2 529 aaKnown RBP15.59■□□□□ 0.09
TUBB3-207ENST00000554927 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 GDF6Q6KF10 455 aaPredicted RBP15.59■□□□□ 0.09
TUBB3-207ENST00000554927 RNF207Q6ZRF8 634 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 FSD1Q9BTV5 496 aa15.59■□□□□ 0.09
TUBB3-207ENST00000554927 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
TUBB3-207ENST00000554927 B4DLN1 442 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 EFCAB14O75071 495 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 PARNO95453 639 aaKnown RBP15.58■□□□□ 0.08
TUBB3-207ENST00000554927 MX1P20591 662 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 MRPL12P52815 198 aaKnown RBP15.58■□□□□ 0.08
TUBB3-207ENST00000554927 AAMPQ13685 434 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 PTPROQ16827 1216 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 SYDE2Q5VT97 1194 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 TTBK2Q6IQ55 1244 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 DCAF4Q8WV16 495 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 C17orf80Q9BSJ5 609 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 FAM50BQ9Y247 325 aa15.58■□□□□ 0.08
TUBB3-207ENST00000554927 SCN10AQ9Y5Y9 1956 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 NBNO60934 754 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 CKBP12277 381 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 GPNMBQ14956 572 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 CHST3Q7LGC8 479 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 C7orf31Q8N865 590 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 TET1Q8NFU7 2136 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 AFG1LQ8WV93 481 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 DHX38Q92620 1227 aaKnown RBP15.57■□□□□ 0.08
TUBB3-207ENST00000554927 SNX27Q96L92 541 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 KCNH6Q9H252 994 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 GPCPD1Q9NPB8 672 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 IL17RBQ9NRM6 502 aa15.57■□□□□ 0.08
TUBB3-207ENST00000554927 FRMPD2Q68DX3 1309 aaPredicted RBP15.57■□□□□ 0.08
TUBB3-207ENST00000554927 RANBP6O60518 1105 aaKnown RBP15.56■□□□□ 0.08
TUBB3-207ENST00000554927 ARIH2O95376 493 aa15.56■□□□□ 0.08
TUBB3-207ENST00000554927 CXCL10P02778 98 aa15.56■□□□□ 0.08
TUBB3-207ENST00000554927 MMP3P08254 477 aa15.56■□□□□ 0.08
TUBB3-207ENST00000554927 RPS6P62753 249 aaKnown RBP15.56■□□□□ 0.08
TUBB3-207ENST00000554927 CTDSPL2Q05D32 466 aa15.56■□□□□ 0.08
TUBB3-207ENST00000554927 TCTN1Q2MV58 587 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms