RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 C20orf194Q5TEA3 1177 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 DNERQ8NFT8 737 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 ARNTL2Q8WYA1 636 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
TMEM253-204ENST00000554844 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 HCN4Q9Y3Q4 1203 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 CHD9Q3L8U1 2897 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 RBM47A0AV96 593 aaKnown RBP11.35□□□□□ -0.59
TMEM253-204ENST00000554844 TLL1O43897 1013 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
TMEM253-204ENST00000554844 PLA2G5P39877 138 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 TFF2Q03403 129 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 SLC30A10Q6XR72 485 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 RASGRP2Q7LDG7 609 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 HERC6Q8IVU3 1022 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 CAGE1Q8TC20 777 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 ANAPC4Q9UJX5 808 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 MTCH2Q9Y6C9 303 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
TMEM253-204ENST00000554844 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
TMEM253-204ENST00000554844 RFXAPO00287 272 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 BMP1P13497 986 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 POU3F3P20264 500 aaPredicted RBP11.34□□□□□ -0.59
TMEM253-204ENST00000554844 KCNQ1P51787 676 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 PTGISQ16647 500 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 HLA-CQ95604 372 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 NECAB3Q96P71 396 aaPredicted RBP11.34□□□□□ -0.59
TMEM253-204ENST00000554844 TMEM47Q9BQJ4 181 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 INCENPQ9NQS7 918 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 RAPGEFL1Q9UHV5 662 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 LCTP09848 1927 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 TANC1Q9C0D5 1861 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
TMEM253-204ENST00000554844 PARNO95453 639 aaKnown RBP11.33□□□□□ -0.6
TMEM253-204ENST00000554844 GH1P01241 217 aa11.33□□□□□ -0.6
TMEM253-204ENST00000554844 RPS6P62753 249 aaKnown RBP11.33□□□□□ -0.6
TMEM253-204ENST00000554844 USH1GQ495M9 461 aa11.33□□□□□ -0.6
TMEM253-204ENST00000554844 AFAP1L1Q8TED9 768 aa11.33□□□□□ -0.6
TMEM253-204ENST00000554844 TCP11L1Q9NUJ3 509 aa11.33□□□□□ -0.6
TMEM253-204ENST00000554844 SCN10AQ9Y5Y9 1956 aa11.33□□□□□ -0.6
TMEM253-204ENST00000554844 SCN5AQ14524 2016 aa11.33□□□□□ -0.6
TMEM253-204ENST00000554844 PRRC2BQ5JSZ5 2229 aaKnown RBP11.32□□□□□ -0.6
TMEM253-204ENST00000554844 A6NJR5 290 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 EFCAB14O75071 495 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 PDHBP11177 359 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 PCP11498 1178 aaKnown RBP11.32□□□□□ -0.6
TMEM253-204ENST00000554844 SELPP16109 830 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 CASTP20810 708 aaKnown RBP11.32□□□□□ -0.6
TMEM253-204ENST00000554844 NOVP48745 357 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
TMEM253-204ENST00000554844 TAP1Q03518 808 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 ALX1Q15699 326 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 CCDC178Q5BJE1 867 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 GPATCH4Q5T3I0 446 aaKnown RBP11.32□□□□□ -0.6
TMEM253-204ENST00000554844 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 CLEC4DQ8WXI8 215 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 COPS5Q92905 334 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 TTC14Q96N46 770 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 KATNAL1Q9BW62 490 aa11.32□□□□□ -0.6
TMEM253-204ENST00000554844 RNF41Q9H4P4 317 aaPredicted RBP11.32□□□□□ -0.6
TMEM253-204ENST00000554844 CHD7Q9P2D1 2997 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 MUC3AQ02505 3323 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 DHX16O60231 1041 aaKnown RBP11.31□□□□□ -0.6
TMEM253-204ENST00000554844 EDNRBP24530 442 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 GRB10Q13322 594 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 DGKDQ16760 1214 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 MCMDC2Q4G0Z9 681 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 CNKSR3Q6P9H4 555 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 LRRC8DQ7L1W4 858 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 OTUD7AQ8TE49 926 aaPredicted RBP11.31□□□□□ -0.6
TMEM253-204ENST00000554844 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
TMEM253-204ENST00000554844 PPP1R13LQ8WUF5 828 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 ESR2Q92731 530 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 MAF1Q9H063 256 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 ABCB11O95342 1321 aa11.31□□□□□ -0.6
TMEM253-204ENST00000554844 EPOPA6NHQ4 379 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 FGAP02671 866 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 MMP3P08254 477 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 FGRP09769 529 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
TMEM253-204ENST00000554844 HAND2P61296 217 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
TMEM253-204ENST00000554844 STXBP2Q15833 593 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms