RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SCN10AQ9Y5Y9 1956 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 GTPBP6O43824 516 aaPredicted RBP28.43■■■□□ 2.14
FOXA1-204ENST00000554607 TXNP10599 105 aaKnown RBP28.43■■■□□ 2.14
FOXA1-204ENST00000554607 HSPD1P10809 573 aaKnown RBP28.43■■■□□ 2.14
FOXA1-204ENST00000554607 POU3F3P20264 500 aaPredicted RBP28.43■■■□□ 2.14
FOXA1-204ENST00000554607 PDE1AP54750 535 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 MFSD6Q6ZSS7 791 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 RGS22Q8NE09 1264 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 FAM227BQ96M60 508 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 MAF1Q9H063 256 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 NCOR1O75376 2440 aa28.43■■■□□ 2.14
FOXA1-204ENST00000554607 CA3P07451 260 aa28.42■■■□□ 2.14
FOXA1-204ENST00000554607 IQCF3P0C7M6 154 aa28.42■■■□□ 2.14
FOXA1-204ENST00000554607 SNHG28P0DPA3 235 aa28.42■■■□□ 2.14
FOXA1-204ENST00000554607 GPATCH4Q5T3I0 446 aaKnown RBP28.42■■■□□ 2.14
FOXA1-204ENST00000554607 FTOQ9C0B1 505 aaKnown RBP eCLIP28.42■■■□□ 2.14
FOXA1-204ENST00000554607 NOD1Q9Y239 953 aa28.42■■■□□ 2.14
FOXA1-204ENST00000554607 A0A0D9SFI3 127 aa28.41■■■□□ 2.14
FOXA1-204ENST00000554607 KIF28PB7ZC32 967 aa28.41■■■□□ 2.14
FOXA1-204ENST00000554607 RNF41Q9H4P4 317 aaPredicted RBP28.41■■■□□ 2.14
FOXA1-204ENST00000554607 HAND2P61296 217 aa28.4■■■□□ 2.14
FOXA1-204ENST00000554607 COPS5Q92905 334 aa28.4■■■□□ 2.14
FOXA1-204ENST00000554607 SKIV2LQ15477 1246 aaKnown RBP28.39■■■□□ 2.14
FOXA1-204ENST00000554607 CCDC155Q8N6L0 562 aa28.39■■■□□ 2.14
FOXA1-204ENST00000554607 MTCH2Q9Y6C9 303 aa28.39■■■□□ 2.14
FOXA1-204ENST00000554607 SCN5AQ14524 2016 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 BAIAP3O94812 1187 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 BMP1P13497 986 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 NT5C2P49902 561 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 DGKHQ86XP1 1220 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 ESR2Q92731 530 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 CCDC171Q6TFL3 1326 aa28.38■■■□□ 2.13
FOXA1-204ENST00000554607 MFAP1P55081 439 aaKnown RBP28.37■■■□□ 2.13
FOXA1-204ENST00000554607 NMIQ13287 307 aaPredicted RBP28.37■■■□□ 2.13
FOXA1-204ENST00000554607 USH1GQ495M9 461 aa28.37■■■□□ 2.13
FOXA1-204ENST00000554607 CCDC178Q5BJE1 867 aa28.37■■■□□ 2.13
FOXA1-204ENST00000554607 HERC6Q8IVU3 1022 aa28.37■■■□□ 2.13
FOXA1-204ENST00000554607 CAGE1Q8TC20 777 aa28.37■■■□□ 2.13
FOXA1-204ENST00000554607 RFXAPO00287 272 aa28.36■■■□□ 2.13
FOXA1-204ENST00000554607 PTGISQ16647 500 aa28.36■■■□□ 2.13
FOXA1-204ENST00000554607 ZNF589Q86UQ0 364 aaPredicted RBP28.36■■■□□ 2.13
FOXA1-204ENST00000554607 PPP1R13LQ8WUF5 828 aa28.36■■■□□ 2.13
FOXA1-204ENST00000554607 CERS4Q9HA82 394 aa28.36■■■□□ 2.13
FOXA1-204ENST00000554607 TRANK1O15050 2925 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 ARIH2O95376 493 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 CHMP4BP1P59074 171 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 CCDC62Q6P9F0 684 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 SESTD1Q86VW0 696 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 NSUN6Q8TEA1 469 aaKnown RBP28.35■■■□□ 2.13
FOXA1-204ENST00000554607 AFAP1L1Q8TED9 768 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 COG5Q9UP83 839 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 ABCB11O95342 1321 aa28.35■■■□□ 2.13
FOXA1-204ENST00000554607 TRIM6-TRIM34B2RNG4 842 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 GH1P01241 217 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 GOLGA8HP0CJ92 632 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 KCNJ6P48051 423 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 TFF2Q03403 129 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 TAP1Q03518 808 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 HDAC1Q13547 482 aaPredicted RBP28.34■■■□□ 2.13
FOXA1-204ENST00000554607 MCF2L2Q86YR7 1114 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 TBC1D10CQ8IV04 446 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 AFG1LQ8WV93 481 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 ARNTL2Q8WYA1 636 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 IWS1Q96ST2 819 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 UBA5Q9GZZ9 404 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 BDP1A6H8Y1 2624 aa28.34■■■□□ 2.13
FOXA1-204ENST00000554607 PRRC2BQ5JSZ5 2229 aaKnown RBP28.34■■■□□ 2.13
FOXA1-204ENST00000554607 ZNF213O14771 459 aa28.33■■■□□ 2.13
FOXA1-204ENST00000554607 PARNO95453 639 aaKnown RBP28.33■■■□□ 2.13
FOXA1-204ENST00000554607 CASTP20810 708 aaKnown RBP28.33■■■□□ 2.13
FOXA1-204ENST00000554607 IQCA1Q86XH1 822 aa28.33■■■□□ 2.13
FOXA1-204ENST00000554607 TANC1Q9C0D5 1861 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 MMP3P08254 477 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 STXBP2Q15833 593 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 CDC37Q16543 378 aaPredicted RBP28.32■■■□□ 2.12
FOXA1-204ENST00000554607 SEPT14Q6ZU15 432 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 PNMA1Q8ND90 353 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 SYTL5Q8TDW5 730 aaPredicted RBP28.32■■■□□ 2.12
FOXA1-204ENST00000554607 RILPL2Q969X0 211 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 ZKSCAN3Q9BRR0 538 aa28.32■■■□□ 2.12
FOXA1-204ENST00000554607 TCF20Q9UGU0 1960 aaKnown RBP28.31■■■□□ 2.12
FOXA1-204ENST00000554607 REV3LO60673 3130 aa28.31■■■□□ 2.12
FOXA1-204ENST00000554607 TLL1O43897 1013 aa28.31■■■□□ 2.12
FOXA1-204ENST00000554607 LY6KQ17RY6 165 aa28.31■■■□□ 2.12
FOXA1-204ENST00000554607 TAAR1Q96RJ0 339 aa28.31■■■□□ 2.12
FOXA1-204ENST00000554607 C1QTNF1Q9BXJ1 281 aa28.31■■■□□ 2.12
FOXA1-204ENST00000554607 KAT14Q9H8E8 782 aa28.31■■■□□ 2.12
FOXA1-204ENST00000554607 EPOPA6NHQ4 379 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 SELPP16109 830 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 RRP1P56182 461 aaKnown RBP28.3■■■□□ 2.12
FOXA1-204ENST00000554607 ARHGAP1Q07960 439 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 DGKDQ16760 1214 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 GDF6Q6KF10 455 aaPredicted RBP28.3■■■□□ 2.12
FOXA1-204ENST00000554607 TBC1D5Q92609 795 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 ANKS1AQ92625 1134 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 NECAB3Q96P71 396 aaPredicted RBP28.3■■■□□ 2.12
FOXA1-204ENST00000554607 RMDN3Q96TC7 470 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 CPVLQ9H3G5 476 aa28.3■■■□□ 2.12
FOXA1-204ENST00000554607 MRPL11Q9Y3B7 192 aaKnown RBP28.3■■■□□ 2.12
FOXA1-204ENST00000554607 XIRP2A4UGR9 3374 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms