RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 DDX4Q9NQI0 724 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 TBC1D7Q9P0N9 293 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 ERLIN1O75477 346 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 KRT83P78385 493 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 DOK7Q18PE1 504 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 KCNK18Q7Z418 384 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 CAGE1Q8TC20 777 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 MMS19Q96T76 1030 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 EPHB6O15197 1021 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 ZNF185O15231 689 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 N4BP1O75113 896 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 ZMYND10O75800 440 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 TANGO6Q9C0B7 1094 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 TTYH3Q9C0H2 523 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 KRT86O43790 486 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 CYP2C19P33261 490 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 ZBED6P86452 979 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 RAD51AP2Q09MP3 1159 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 TUBB2AQ13885 445 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 CCDC155Q8N6L0 562 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 MSANTD4Q8NCY6 345 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 BBXQ8WY36 941 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 GDAP1L1Q96MZ0 367 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 TUBB2BQ9BVA1 445 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 JADE2Q9NQC1 790 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 SAR1BQ9Y6B6 198 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 CDK5RAP2Q96SN8 1893 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 POTEB2H3BUK9 544 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 PHACTR2O75167 634 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 NT5C2P49902 561 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 MTMR9Q96QG7 549 aa17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-203ENST00000554514 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 C15orf52Q6ZUT6 534 aaKnown RBP17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 HDXQ7Z353 690 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 TRAPPC11Q7Z392 1133 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 NUP58Q9BVL2 599 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 UBXN6Q9BZV1 441 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 FAM196BA6NMK8 535 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 ECM1Q16610 540 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 DDX12PQ92771 950 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 DEF6Q9H4E7 631 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 USP40Q9NVE5 1235 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 VPS18Q9P253 973 aa17.46■□□□□ 0.39
ARHGEF40-203ENST00000554514 PSMD14O00487 310 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 EDIL3O43854 480 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 MEA1Q16626 185 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 PSMB7Q99436 277 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 RAB21Q9UL25 225 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 GAKO14976 1311 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L10C9JJH3 530 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 VWA3BQ502W6 1294 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 NDST4Q9H3R1 872 aa17.45■□□□□ 0.38
ARHGEF40-203ENST00000554514 CCDC66A2RUB6 948 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 CACNB3P54284 484 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 SPA17Q15506 151 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 ASPRV1Q53RT3 343 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 UNC13DQ70J99 1090 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 RAD54LQ92698 747 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 DDX25Q9UHL0 483 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 MAP2K7O14733 419 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 ZNF263O14978 683 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 BBOX1O75936 387 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 DDR1Q08345 913 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 KIF5AQ12840 1032 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 MEX3CQ5U5Q3 659 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 RRAGAQ7L523 313 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 CERS5Q8N5B7 392 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 RAB34Q9BZG1 259 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 TTLL1O95922 423 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 LMAN1P49257 510 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 CENPPQ6IPU0 288 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 GSPT2Q8IYD1 628 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 ZHX3Q9H4I2 956 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 L1RE1Q9UN81 338 aa17.44■□□□□ 0.38
ARHGEF40-203ENST00000554514 G3V3G9 751 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 MRPS25P82663 173 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 CASP8Q14790 479 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms