RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 DHX16O60231 1041 aaKnown RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 CABYRO75952 493 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 ASGR1P07306 291 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 ANTXR2P58335 489 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 GHRHRQ02643 423 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 TLE2Q04725 743 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 TLK2Q86UE8 772 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 TDHQ8IZJ6 230 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 IGDCC4Q8TDY8 1250 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 AP5M1Q9H0R1 490 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 MUC3AQ02505 3323 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 SLC27A2O14975 620 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 ZBTB5O15062 677 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 NKRFO15226 690 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 CLTBP09497 229 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 SMPD1P17405 629 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 MCM5P33992 734 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 PLA2G5P39877 138 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 PDE4DQ08499 809 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 NECTIN1Q15223 517 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 NOL8Q76FK4 1167 aaKnown RBP12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 EEPD1Q7L9B9 569 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 CATIPQ7Z7H3 387 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 DEFB123Q8N688 67 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 MAP3K20Q9NYL2 800 aaKnown RBP12.1□□□□□ -0.47
PTCD2P1-201ENST00000554393 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 DCDC2CA8MYV0 355 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 KIAA0355O15063 1070 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 ZEB2O60315 1214 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 CDC45O75419 566 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 DDAH1O94760 285 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 C7P10643 843 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 CDK7P50613 346 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 CREB3L3Q68CJ9 461 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 GPR153Q6NV75 609 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 SYTL5Q8TDW5 730 aaPredicted RBP12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 SCFD2Q8WU76 684 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 WDR11Q9BZH6 1224 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 LY9Q9HBG7 655 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 PRDM5Q9NQX1 630 aaPredicted RBP12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 DDX49Q9Y6V7 483 aaKnown RBP12.09□□□□□ -0.47
PTCD2P1-201ENST00000554393 EYSQ5T1H1 3165 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 TRIM43BA6NCK2 446 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 ARVCFO00192 962 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 DYNC1LI2O43237 492 aaPredicted RBP12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 PRC1O43663 620 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 KIF5BP33176 963 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 LIFRP42702 1097 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 HSD17B4P51659 736 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 CHST3Q7LGC8 479 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 SKAP1Q86WV1 359 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 TRIM43Q96BQ3 446 aaPredicted RBP12.08□□□□□ -0.48
PTCD2P1-201ENST00000554393 PNMA6FA0A0J9YX94 578 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 SH2B2O14492 632 aaPredicted RBP12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 OPLAHO14841 1288 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CYTH3O43739 400 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 PPP1R11O60927 126 aaPredicted RBP12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CALM1P0DP23 149 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CALM2P0DP24 149 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CALM3P0DP25 149 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CPT1AP50416 773 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 BEX3Q00994 111 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 TTLL4Q14679 1199 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 SLC35G1Q2M3R5 365 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CXCL17Q6UXB2 119 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms