RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 MYL3P08590 195 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 ALDH5A1P51649 535 aaPredicted RBP16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 DUSP28Q4G0W2 176 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 SYDE2Q5VT97 1194 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 PPP2R2DQ66LE6 453 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 TBC1D10CQ8IV04 446 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 MORC4Q8TE76 937 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 ASB2Q96Q27 587 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 POLR3EQ9NVU0 708 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 ORC4O43929 436 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 CYP2C9P11712 490 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 CALML3P27482 149 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 ANAPC15P60006 121 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 MRPS5P82675 430 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 IMMTQ16891 758 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 MICALL1Q8N3F8 863 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 OR6J1Q8NGC5 347 aa16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-202ENST00000554365 GBF1Q92538 1859 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 ZNF213O14771 459 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 MYOGP15173 224 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 NOVP48745 357 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 CPT1AP50416 773 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 PURAQ00577 322 aaKnown RBP16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 FAM47CQ5HY64 1035 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 DEFB128Q7Z7B8 93 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 TMEM47Q9BQJ4 181 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 LCTP09848 1927 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 TNKSO95271 1327 aa16.34■□□□□ 0.21
SPTLC2-202ENST00000554365 FGRP09769 529 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 PDE4DQ08499 809 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 ADAMTS19Q8TE59 1207 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 MTG1Q9BT17 334 aaPredicted RBP16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 PCDHA11Q9Y5I1 949 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 TTC28Q96AY4 2481 aa16.33■□□□□ 0.2
SPTLC2-202ENST00000554365 CHD9Q3L8U1 2897 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 E7EWF7 191 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 PFKMP08237 780 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 NEDD4P46934 1319 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 BRDTQ58F21 947 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 RNF207Q6ZRF8 634 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 VWCEQ96DN2 955 aa16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-202ENST00000554365 LOC102724159A0A0B4J2E5 919 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 RBM47A0AV96 593 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 PDHBP11177 359 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 COL9A1P20849 921 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 PWP2Q15269 919 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 CLEC4DQ8WXI8 215 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 TM6SF1Q9BZW5 370 aa16.31■□□□□ 0.2
SPTLC2-202ENST00000554365 ACTN1P12814 892 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 RPS6P62753 249 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 COPS5Q92905 334 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 CERS4Q9HA82 394 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 MUC3AQ02505 3323 aa16.3■□□□□ 0.2
SPTLC2-202ENST00000554365 NKRFO15226 690 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 CA3P07451 260 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 CPA1P15085 419 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 KRT32Q14532 448 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 SKIV2LQ15477 1246 aaKnown RBP16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 USH1GQ495M9 461 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 FTOQ9C0B1 505 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
SPTLC2-202ENST00000554365 WDR19Q8NEZ3 1342 aa16.28■□□□□ 0.2
SPTLC2-202ENST00000554365 RFXAPO00287 272 aa16.28■□□□□ 0.2
SPTLC2-202ENST00000554365 EDNRBP24530 442 aa16.28■□□□□ 0.2
SPTLC2-202ENST00000554365 RFC2P35250 354 aa16.28■□□□□ 0.2
SPTLC2-202ENST00000554365 DNERQ8NFT8 737 aa16.28■□□□□ 0.2
SPTLC2-202ENST00000554365 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
SPTLC2-202ENST00000554365 MYO9BQ13459 2157 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 A6NJR5 290 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 B4DLN1 442 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms