RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 GPATCH3Q96I76 525 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 NEUROD6Q96NK8 337 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 CSRNP1Q96S65 589 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
KTN1-213ENST00000554306 OSBPL1AQ9BXW6 950 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 ABCB6Q9NP58 842 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 IL1RAPL2Q9NP60 686 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 GPR108Q9NPR9 543 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 MINPP1Q9UNW1 487 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 ATP6V0A2Q9Y487 856 aa8.16□□□□□ -1.1
KTN1-213ENST00000554306 BRCA1P38398 1863 aaKnown RBP8.15□□□□□ -1.1
KTN1-213ENST00000554306 KIAA1551Q9HCM1 1747 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 LRP5O75197 1615 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 TAF5LO75529 589 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 F13BP05160 661 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 CTSBP07858 339 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.1
KTN1-213ENST00000554306 SLC5A1P13866 664 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 UBE4AQ14139 1066 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 PUM3Q15397 648 aaKnown RBP8.15□□□□□ -1.1
KTN1-213ENST00000554306 ATP2B3Q16720 1220 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 DALRD3Q5D0E6 543 aaKnown RBP8.15□□□□□ -1.1
KTN1-213ENST00000554306 SOGA3Q5TF21 947 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 MCTP1Q6DN14 999 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 LPIN2Q92539 896 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 GNEQ9Y223 722 aaKnown RBP8.15□□□□□ -1.1
KTN1-213ENST00000554306 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
KTN1-213ENST00000554306 LRRC37AA6NMS7 1700 aa8.15□□□□□ -1.11
KTN1-213ENST00000554306 XDHP47989 1333 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 SYNGAP1Q96PV0 1343 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.14□□□□□ -1.11
KTN1-213ENST00000554306 A0A1B0GUL7 405 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 TMEM238LA0A1B0GVL6 79 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 WNT11O96014 354 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 KCNA3P22001 575 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 TIMM10P62072 90 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 MAP7Q14244 749 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 TNNI3KQ59H18 835 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 CCDC8Q9H0W5 538 aaPredicted RBP8.14□□□□□ -1.11
KTN1-213ENST00000554306 FPGT-TNNI3KV9GXZ4 949 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 ARAP2Q8WZ64 1704 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 COL4A1P02462 1669 aa8.14□□□□□ -1.11
KTN1-213ENST00000554306 MYH13Q9UKX3 1938 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 ZNF804BA4D1E1 1349 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 UFL1O94874 794 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 BRD1O95696 1058 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 FOSL1P15407 271 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 MX1P20591 662 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 RGS3P49796 1198 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 IRAK1P51617 712 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 GPSM2P81274 684 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 CCDC93Q567U6 631 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 CAVIN4Q5BKX8 364 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 CCDC158Q5M9N0 1113 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 DPP8Q6V1X1 898 aaPredicted RBP8.13□□□□□ -1.11
KTN1-213ENST00000554306 DYMQ7RTS9 669 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 ZAR1Q86SH2 424 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 C16orf71Q8IYS4 520 aaPredicted RBP8.13□□□□□ -1.11
KTN1-213ENST00000554306 RTKN2Q8IZC4 609 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 VGLL2Q8N8G2 317 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 SUPT20HQ8NEM7 779 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 EAF2Q96CJ1 260 aaPredicted RBP8.13□□□□□ -1.11
KTN1-213ENST00000554306 TBC1D32Q96NH3 1257 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 EYA3Q99504 573 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 GNL3LQ9NVN8 582 aaKnown RBP8.13□□□□□ -1.11
KTN1-213ENST00000554306 BIN2Q9UBW5 565 aaPredicted RBP8.13□□□□□ -1.11
KTN1-213ENST00000554306 PRKAG2Q9UGJ0 569 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 DCTN4Q9UJW0 460 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 AP4E1Q9UPM8 1137 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 AK9Q5TCS8 1911 aa8.13□□□□□ -1.11
KTN1-213ENST00000554306 ZNF609O15014 1411 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 ERC2O15083 957 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 UQCRFS1P1P0C7P4 283 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 GRM2Q14416 872 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 TTC39AQ5SRH9 613 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 NLGN2Q8NFZ4 835 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 SYT17Q9BSW7 474 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 TRAIPQ9BWF2 469 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 ECHDC1Q9NTX5 307 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 PODXL2Q9NZ53 605 aa8.12□□□□□ -1.11
KTN1-213ENST00000554306 OAS3Q9Y6K5 1087 aaKnown RBP8.12□□□□□ -1.11
KTN1-213ENST00000554306 CHD4Q14839 1912 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 TTC41PQ6P2S7 1318 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 AOC2O75106 756 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 FRAT2O75474 233 aaPredicted RBP8.11□□□□□ -1.11
KTN1-213ENST00000554306 ECEL1O95672 775 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 RAB6AP20340 208 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 FGFR2P21802 821 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 HIBADHP31937 336 aaKnown RBP8.11□□□□□ -1.11
KTN1-213ENST00000554306 PDE1AP54750 535 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 CYP27A1Q02318 531 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 GLIS3Q8NEA6 775 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
KTN1-213ENST00000554306 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
KTN1-213ENST00000554306 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
KTN1-213ENST00000554306 SEMA6CQ9H3T2 930 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms