RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 TCHPQ9BT92 498 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 HIPK3Q9H422 1215 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TRMT13Q9NUP7 481 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 DDX20Q9UHI6 824 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PPP1R9AQ9ULJ8 1098 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 CIZ1Q9ULV3 898 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 NOP58Q9Y2X3 529 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 NUP98P52948 1817 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SCN11AQ9UI33 1791 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 ABCB11O95342 1321 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SPTAN1Q13813 2472 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SMCHD1A6NHR9 2005 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 CACNA1BQ00975 2339 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM265A0A087WTH1 108 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TK2O00142 265 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 C2CD2LO14523 706 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZBTB43O43298 467 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZEB2O60315 1214 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MCM5P33992 734 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 METAP2P50579 478 aaKnown RBP eCLIP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 PPP4CP60510 307 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ARHGAP4P98171 946 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 CYP4A11Q02928 519 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MTX1Q13505 466 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 FSCN1Q16658 493 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 QRICH1Q2TAL8 776 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 LETM2Q2VYF4 491 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 PRR16Q569H4 304 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF697Q5TEC3 545 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 FKBP1CQ5VVH2 108 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KRT40Q6A162 431 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GPAT2Q6NUI2 795 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KANK3Q6NY19 840 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 NLRX1Q86UT6 975 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 FERMT3Q86UX7 667 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ABI1Q8IZP0 508 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MTMR14Q8NCE2 650 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MYLIPQ8WY64 445 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF333Q96JL9 665 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 NEK1Q96PY6 1258 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZSCAN10Q96SZ4 725 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 YME1L1Q96TA2 773 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GAS2L1Q99501 681 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 PLCD4Q9BRC7 762 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ANP32EQ9BTT0 268 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KRT23Q9C075 422 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KIAA1683Q9H0B3 1180 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MTIF3Q9H2K0 278 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 PSTPIP2Q9H939 334 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SENP2Q9HC62 589 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 A1CFQ9NQ94 594 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 FLRT1Q9NZU1 646 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 LRFN2Q9ULH4 789 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 AKT3Q9Y243 479 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TMX2Q9Y320 296 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TACC3Q9Y6A5 838 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 CACNA1EQ15878 2313 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 AFDNP55196 1824 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 EYSQ5T1H1 3165 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GCOM1H8Y6P7 765 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 M0QZ92 97 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 POLR2MP0CAP2 368 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GHRP10912 638 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MYOGP15173 224 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF200P98182 395 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TTLL4Q14679 1199 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 STXBP2Q15833 593 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 RTN1Q16799 776 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 LRRC26Q2I0M4 334 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZMYM1Q5SVZ6 1142 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 C9orf50Q5SZB4 431 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 RCSD1Q6JBY9 416 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GPR153Q6NV75 609 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TRAF7Q6Q0C0 670 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 Q6ZUG5 572 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF365Q70YC5 407 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ADGRF4Q8IZF3 695 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 LPAR1Q92633 364 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ATP6V0A1Q93050 837 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 HHIPL1Q96JK4 782 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 AMNQ9BXJ7 453 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GPR108Q9NPR9 543 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SAGE1Q9NXZ1 904 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 VPS54Q9P1Q0 977 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TAF6LQ9Y6J9 622 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GAKO14976 1311 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 NEDD4P46934 1319 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 RAD50Q92878 1312 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 CCDC194A0A1B0GVG4 234 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MYADML2A6NDP7 307 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 H3BQ06 376 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 STRNO43815 780 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TLL1O43897 1013 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 REC8O95072 547 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 PLEKHA8P1O95397 391 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SLC25A27O95847 323 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KRT18P05783 430 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 CYP21A2P08686 494 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 BCRP11274 1271 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GJA8P48165 433 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms