RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 WDR46O15213 610 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 CCP110O43303 1012 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 MBD4O95243 580 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 CTDNEP1O95476 244 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 RAG1P15918 1043 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 DNAJB2P25686 324 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 PDIA3P30101 505 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 FAM193AP78312 1265 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 FPGSQ05932 587 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 SNW1Q13573 536 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 TTF1Q15361 905 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 C1orf53Q5VUE5 145 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 CEP135Q66GS9 1140 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 ADALQ6DHV7 355 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 STOX1Q6ZVD7 989 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 RNF180Q86T96 592 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 FMR1NBQ8N0W7 255 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 CCDC150Q8NCX0 1101 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 CACTINQ8WUQ7 758 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 TINF2Q9BSI4 451 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 SH2D4AQ9H788 454 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 PRDM6Q9NQX0 595 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 SWAP70Q9UH65 585 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 NRBP1Q9UHY1 535 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 PRDM4Q9UKN5 801 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 TMX2Q9Y320 296 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 TACC3Q9Y6A5 838 aa8.2□□□□□ -1.1
MTHFD1-205ENST00000554057 MYH15Q9Y2K3 1946 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 TMEM265A0A087WTH1 108 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 RAD21O60216 631 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 ADAMTS4O75173 837 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 KIF20AO95235 890 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 SLC25A27O95847 323 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 CHGBP05060 677 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 ZNF865P0CJ78 1059 aaPredicted RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 HSPD1P10809 573 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 EEF2P13639 858 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 AKR1A1P14550 325 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 CDK8P49336 464 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 NCBP1Q09161 790 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 KCTD2Q14681 263 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 PTPN14Q15678 1187 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 ZRSR1Q15695 479 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 ZNF792Q3KQV3 632 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 FAM83BQ5T0W9 1011 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 RIOX2Q8IUF8 465 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 FSIP1Q8NA03 581 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 DDX11Q96FC9 970 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 TIGD1Q96MW7 591 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 STARD7Q9NQZ5 370 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 ZHX1Q9UKY1 873 aaPredicted RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 ZNF214Q9UL59 606 aaPredicted RBP8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 SYNRGQ9UMZ2 1314 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 MCM3APO60318 1980 aa8.19□□□□□ -1.1
MTHFD1-205ENST00000554057 MYADML2A6NDP7 307 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 VWA5AO00534 786 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 SKILP12757 684 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 ZSCAN20P17040 1043 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 ADD2P35612 726 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 STAT3P40763 770 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 ME1P48163 572 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 GABPB1Q06547 395 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 FAAP100Q0VG06 881 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 LRMPQ12912 555 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 COL9A3Q14050 684 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 IMMTQ16891 758 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 CCDC129Q6ZRS4 1044 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 CREBRFQ8IUR6 639 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 DHX40Q8IX18 779 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 REPS2Q8NFH8 660 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 KIF18AQ8NI77 898 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 USP28Q96RU2 1077 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 NUP88Q99567 741 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 GOLPH3LQ9H4A5 285 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 NCOR1O75376 2440 aa8.18□□□□□ -1.1
MTHFD1-205ENST00000554057 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 FAM237AA0A1B0GTK4 181 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 CCDC69A6NI79 296 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 GRXCR1A8MXD5 290 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 DCDC2CA8MYV0 355 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 USP17L21D6R901 530 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 IKBKBO14920 756 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 CDKL5O76039 1030 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 CMA1P23946 247 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 PBX2P40425 430 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 ACLYP53396 1101 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 NLRP12P59046 1061 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 STK38Q15208 465 aa8.17□□□□□ -1.1
MTHFD1-205ENST00000554057 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms