RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TRIM50Q86XT4 487 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 NPLOC4Q8TAT6 608 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 ABCF2Q9UG63 623 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 HERC5Q9UII4 1024 aaKnown RBP8.49□□□□□ -1.05
ATXN3-224ENST00000554040 RABGAP1Q9Y3P9 1069 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 HCN4Q9Y3Q4 1203 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 PHIPQ8WWQ0 1821 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 FANCIQ9NVI1 1328 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 KIAA0355O15063 1070 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 ATP9BO43861 1147 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 RAD21O60216 631 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 CNMDO75829 334 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 ASNSP08243 561 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 CYBAP13498 195 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 ADCYAP1R1P41586 468 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 SFSWAPQ12872 951 aaKnown RBP8.48□□□□□ -1.05
ATXN3-224ENST00000554040 DDX10Q13206 875 aaKnown RBP8.48□□□□□ -1.05
ATXN3-224ENST00000554040 ADGRE1Q14246 886 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 GRB14Q14449 540 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 ATP2B3Q16720 1220 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-224ENST00000554040 FERMT2Q96AC1 680 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 SLC30A3Q99726 388 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 LRFN3Q9BTN0 628 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 GINM1Q9NU53 330 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 PI4KBQ9UBF8 816 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 GPC6Q9Y625 555 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-224ENST00000554040 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
ATXN3-224ENST00000554040 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-224ENST00000554040 SEPT4O43236 478 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 CLTBP09497 229 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 RAG1P15918 1043 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 JAG1P78504 1218 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 FPGSQ05932 587 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 LRRC41Q15345 812 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 CCDC85BQ15834 202 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-224ENST00000554040 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 OLFML2BQ68BL8 750 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 ZNF384Q8TF68 577 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-224ENST00000554040 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-224ENST00000554040 ZNF232Q9UNY5 417 aa8.47□□□□□ -1.05
ATXN3-224ENST00000554040 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L15C9J2P7 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L13C9JLJ4 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L11C9JVI0 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L18D6R9N7 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L22D6RA61 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L17D6RBQ6 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L19D6RCP7 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L20D6RJB6 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 M0R2N6 131 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 PIK3R2O00459 728 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 CIAO1O76071 339 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 LDHCP07864 332 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 FURINP09958 794 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 PSMA6P60900 246 aaKnown RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 MECOMQ03112 1051 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 RASGRF1Q13972 1273 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 COL9A3Q14050 684 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 CATSPERGQ6ZRH7 1159 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 DPP9Q86TI2 863 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 FOXP4Q8IVH2 680 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 SIX5Q8N196 739 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 PBX4Q9BYU1 374 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 USP44Q9H0E7 712 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 DHX36Q9H2U1 1008 aaKnown RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 EPHX3Q9H6B9 360 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 PRKRIP1Q9H875 184 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 TMEM39AQ9NV64 488 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 DOCK1Q14185 1865 aa8.46□□□□□ -1.06
ATXN3-224ENST00000554040 PDS5AQ29RF7 1337 aaKnown RBP8.46□□□□□ -1.06
ATXN3-224ENST00000554040 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 CACNA1FO60840 1977 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 GRXCR1A8MXD5 290 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 SIN3BO75182 1162 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 IGFBP4P22692 258 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 ADORA1P30542 326 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 GSTO1P78417 241 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 SHROOM1Q2M3G4 852 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-224ENST00000554040 TMEM31Q5JXX7 168 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 LBX2Q6XYB7 198 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 CCDC129Q6ZRS4 1044 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 WDR63Q8IWG1 891 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 TEX11Q8IYF3 940 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms