RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PCDHA8Q9Y5H6 950 aa14.02□□□□□ -0.17
SHMT2-209ENST00000553949 ZNF236Q9UL36 1845 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 FOSP01100 380 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-209ENST00000553949 SYT1P21579 422 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 ALDH5A1P51649 535 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-209ENST00000553949 CCL14Q16627 93 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 MCTP2Q6DN12 878 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 CTU1Q7Z7A3 348 aaKnown RBP14.01□□□□□ -0.17
SHMT2-209ENST00000553949 DIS3L2Q8IYB7 885 aaKnown RBP14.01□□□□□ -0.17
SHMT2-209ENST00000553949 RAET1EQ8TD07 263 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 PGBD1Q96JS3 809 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 PXMP2Q9NR77 195 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 FLRT1Q9NZU1 646 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 PTPN22Q9Y2R2 807 aa14.01□□□□□ -0.17
SHMT2-209ENST00000553949 MGAMO43451 1857 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 RPTORQ8N122 1335 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 PLXNB2O15031 1838 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 BTBD18B2RXH4 712 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 EIF2AK2P19525 551 aaKnown RBP14□□□□□ -0.17
SHMT2-209ENST00000553949 NR5A1Q13285 461 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
SHMT2-209ENST00000553949 OLFML2BQ68BL8 750 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 MAMDC4Q6UXC1 1216 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 TRMT44Q8IYL2 757 aaKnown RBP14□□□□□ -0.17
SHMT2-209ENST00000553949 MSL3Q8N5Y2 521 aaKnown RBP14□□□□□ -0.17
SHMT2-209ENST00000553949 IWS1Q96ST2 819 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 PDCD2LQ9BRP1 358 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 ANO3Q9BYT9 981 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 EHMT1Q9H9B1 1298 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 DAXXQ9UER7 740 aaPredicted RBP14□□□□□ -0.17
SHMT2-209ENST00000553949 PTCH2Q9Y6C5 1203 aa14□□□□□ -0.17
SHMT2-209ENST00000553949 VPS37CA5D8V6 355 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-209ENST00000553949 ASB14A6NK59 587 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 ADCY3O60266 1144 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 IGHA2P01877 340 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 EDNRBP24530 442 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 UBXN2AP68543 259 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 PGM5Q15124 567 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 KRT25Q7Z3Z0 450 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 PXYLP1Q8TE99 480 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 TRIB2Q92519 343 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 TNFRSF25Q93038 417 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
SHMT2-209ENST00000553949 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
SHMT2-209ENST00000553949 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-209ENST00000553949 DDX49Q9Y6V7 483 aaKnown RBP13.99□□□□□ -0.17
SHMT2-209ENST00000553949 RBBP6Q7Z6E9 1792 aaKnown RBP13.99□□□□□ -0.17
SHMT2-209ENST00000553949 SYNGAP1Q96PV0 1343 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 CCDC194A0A1B0GVG4 234 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 B4DLN1 442 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 STX6O43752 255 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 NR3C2P08235 984 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 ELNP15502 786 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 SREBF1P36956 1147 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 PDE4DQ08499 809 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 MCTP1Q6DN14 999 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 PIK3AP1Q6ZUJ8 805 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 ARMCX2Q7L311 632 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 IL31RAQ8NI17 732 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 MORC4Q8TE76 937 aa13.98□□□□□ -0.17
SHMT2-209ENST00000553949 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 KIF28PB7ZC32 967 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 SNAI1O95863 264 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 CCND2P30279 289 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 CYP2C19P33261 490 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 NONOQ15233 471 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 PKN2Q16513 984 aaKnown RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 EARS2Q5JPH6 523 aaKnown RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 PCNX4Q63HM2 1172 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 VSIG10LQ86VR7 867 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 CRYGNQ8WXF5 182 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-209ENST00000553949 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
SHMT2-209ENST00000553949 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
SHMT2-209ENST00000553949 HMGCRP04035 888 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 GRK4P32298 578 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 MRPS9P82933 396 aaKnown RBP13.96□□□□□ -0.17
SHMT2-209ENST00000553949 STXBP2Q15833 593 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 INF2Q27J81 1249 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-209ENST00000553949 NOSTRINQ8IVI9 506 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 TBCKQ8TEA7 893 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 DOCK3Q8IZD9 2030 aa13.96□□□□□ -0.17
SHMT2-209ENST00000553949 HTTP42858 3142 aa13.96□□□□□ -0.18
SHMT2-209ENST00000553949 LCTP09848 1927 aa13.96□□□□□ -0.18
SHMT2-209ENST00000553949 EDIL3O43854 480 aa13.95□□□□□ -0.18
SHMT2-209ENST00000553949 STAM2O75886 525 aa13.95□□□□□ -0.18
SHMT2-209ENST00000553949 INHAP05111 366 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms