RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 RRP36Q96EU6 259 aaKnown RBP10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 USP40Q9NVE5 1235 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 SHTN1A0MZ66 631 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 POTEB2H3BUK9 544 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 RPN1P04843 607 aaKnown RBP10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 GBP3Q9H0R5 595 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 CD248Q9HCU0 757 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 ADD3Q9UEY8 706 aaKnown RBP10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
AL049839.2-201ENST00000553947 IGKV6D-41A0A0C4DH26 115 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 MMP10P09238 476 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 NPR1P16066 1061 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 NFIAQ12857 509 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 CDC42EP5Q6NZY7 148 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 CEP57Q86XR8 500 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 ZFPM1Q8IX07 1006 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 COA7Q96BR5 231 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 RIOX1Q9H6W3 641 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 KIF3CO14782 793 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 PBX1P40424 430 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 PRCPP42785 496 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 APOBEC3HQ6NTF7 200 aaKnown RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 PNKPQ96T60 521 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 BAG1Q99933 345 aaPredicted RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 TRIM6Q9C030 488 aaPredicted RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 DBNDD1Q9H9R9 158 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 GOLGA6L9A6NEM1 432 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 EDIL3O43854 480 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 SHMT1P34896 483 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 UBA7P41226 1012 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 NONOQ15233 471 aaKnown RBP eCLIP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 ZNF658Q5TYW1 1059 aaPredicted RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 TOGARAM2Q6ZUX3 1019 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 SRGAP1Q7Z6B7 1085 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 BCAS4Q8TDM0 211 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 TBCKQ8TEA7 893 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 CPLX3Q8WVH0 158 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 HNRNPLLQ8WVV9 542 aaKnown RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 SEC63Q9UGP8 760 aaKnown RBP10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 PLIN4Q96Q06 1357 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 NRXN2Q9P2S2 1712 aa10.05□□□□□ -0.8
AL049839.2-201ENST00000553947 TRIM49BA6NDI0 452 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 MYO1FO00160 1098 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 KLRC4O43908 158 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 CCT6AP40227 531 aaKnown RBP10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 CACNB3P54284 484 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 RBL2Q08999 1139 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 MTF1Q14872 753 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 TTBK2Q6IQ55 1244 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 KRT25Q7Z3Z0 450 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 RASSF8Q8NHQ8 419 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 NELFBQ8WX92 580 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 PYM1Q9BRP8 204 aaKnown RBP10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SERPINB13Q9UIV8 391 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 QSER1Q2KHR3 1735 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 APBA3O96018 575 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SNHG28P0DPA3 235 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SMARCA1P28370 1054 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 PMS1P54277 932 aaKnown RBP10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 PAK1Q13153 545 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 KRT31Q15323 416 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 TACO1Q9BSH4 297 aaKnown RBP10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 CCSER1Q9C0I3 900 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 RWDD2AQ9UIY3 292 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SUGT1Q9Y2Z0 365 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SH3BP1Q9Y3L3 701 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 SAMM50Q9Y512 469 aa10.04□□□□□ -0.8
AL049839.2-201ENST00000553947 FAM196BA6NMK8 535 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 CHUKO15111 745 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 OR52Z1P0C646 297 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 GNA11P29992 359 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 PRPHP41219 470 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 CLNS1AP54105 237 aaKnown RBP10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 SOGA3Q5TF21 947 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 NEK8Q86SG6 692 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 CEP112Q8N8E3 955 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 IGSF22Q8N9C0 903 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 DESI2Q9BSY9 194 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 ANKZF1Q9H8Y5 726 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 LZTFL1Q9NQ48 299 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 STX10O60499 249 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 PPP1R11O60927 126 aaPredicted RBP10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 GCFC2P16383 781 aaKnown RBP10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 PLCG1P19174 1290 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 ALDH1B1P30837 517 aa10.03□□□□□ -0.8
AL049839.2-201ENST00000553947 TECP42680 631 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms