RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 TMEM63BQ5T3F8 832 aa20.56■□□□□ 0.88
FOXN3-204ENST00000553840 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
FOXN3-204ENST00000553840 TMTC2Q8N394 836 aa20.56■□□□□ 0.88
FOXN3-204ENST00000553840 SLC43A3Q8NBI5 491 aa20.56■□□□□ 0.88
FOXN3-204ENST00000553840 IGDCC4Q8TDY8 1250 aa20.56■□□□□ 0.88
FOXN3-204ENST00000553840 RIOX1Q9H6W3 641 aa20.56■□□□□ 0.88
FOXN3-204ENST00000553840 KPNA6O60684 536 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 MYL3P08590 195 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 PTGS1P23219 599 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 KIF5BP33176 963 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 C9orf50Q5SZB4 431 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 RNF20Q5VTR2 975 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 TMEM199Q8N511 208 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 CTCFLQ8NI51 663 aaPredicted RBP20.55■□□□□ 0.88
FOXN3-204ENST00000553840 TMEM87BQ96K49 555 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 PIGSQ96S52 555 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 MAP3K14Q99558 947 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 SENP2Q9HC62 589 aa20.55■□□□□ 0.88
FOXN3-204ENST00000553840 SLC27A2O14975 620 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 PRC1O43663 620 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 DDAH1O94760 285 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 ANTXR2P58335 489 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 PPIGQ13427 754 aaKnown RBP eCLIP20.54■□□□□ 0.886e-8■□□□□ 10.1
FOXN3-204ENST00000553840 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 SEPT14Q6ZU15 432 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 RNPC3Q96LT9 517 aaKnown RBP20.54■□□□□ 0.88
FOXN3-204ENST00000553840 MTG1Q9BT17 334 aaPredicted RBP20.54■□□□□ 0.88
FOXN3-204ENST00000553840 COL20A1Q9P218 1284 aa20.54■□□□□ 0.88
FOXN3-204ENST00000553840 BAZ2BQ9UIF8 2168 aaKnown RBP20.53■□□□□ 0.88
FOXN3-204ENST00000553840 PNMA6FA0A0J9YX94 578 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 CCDC69A6NI79 296 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 CD4P01730 458 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 HSD17B4P51659 736 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 PURAQ00577 322 aaKnown RBP20.53■□□□□ 0.88
FOXN3-204ENST00000553840 GHRHRQ02643 423 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 NECTIN1Q15223 517 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 CREB3L3Q68CJ9 461 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 PPP1R12CQ9BZL4 782 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 LY9Q9HBG7 655 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 PXMP2Q9NR77 195 aa20.53■□□□□ 0.88
FOXN3-204ENST00000553840 PPP1R11O60927 126 aaPredicted RBP20.52■□□□□ 0.88
FOXN3-204ENST00000553840 EIF3JO75822 258 aaKnown RBP20.52■□□□□ 0.88
FOXN3-204ENST00000553840 NR3C2P08235 984 aa20.52■□□□□ 0.88
FOXN3-204ENST00000553840 EIF2AK2P19525 551 aaKnown RBP20.52■□□□□ 0.88
FOXN3-204ENST00000553840 GNAQP50148 359 aa20.52■□□□□ 0.88
FOXN3-204ENST00000553840 PSMC6P62333 389 aa20.52■□□□□ 0.88
FOXN3-204ENST00000553840 FAM109BQ6ICB4 259 aaPredicted RBP20.52■□□□□ 0.88
FOXN3-204ENST00000553840 LZTS2Q9BRK4 669 aa20.52■□□□□ 0.88
FOXN3-204ENST00000553840 SZT2Q5T011 3432 aa20.52■□□□□ 0.88
FOXN3-204ENST00000553840 A6NJR5 290 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 GCOM1H8Y6P7 765 aaPredicted RBP20.51■□□□□ 0.87
FOXN3-204ENST00000553840 GH1P01241 217 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 SUPT20HL2P0C7V6 817 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 POLR2MP0CAP2 368 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 CALM1P0DP23 149 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 CALM2P0DP24 149 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 CALM3P0DP25 149 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 SMARCA1P28370 1054 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 COPS5Q92905 334 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 RRP36Q96EU6 259 aaKnown RBP20.51■□□□□ 0.87
FOXN3-204ENST00000553840 SEC63Q9UGP8 760 aaKnown RBP20.51■□□□□ 0.87
FOXN3-204ENST00000553840 GRIN2DO15399 1336 aa20.51■□□□□ 0.87
FOXN3-204ENST00000553840 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 OPLAHO14841 1288 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 CYTH3O43739 400 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 CDC45O75419 566 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 LIFRP42702 1097 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 SMAD3P84022 425 aaKnown RBP20.5■□□□□ 0.87
FOXN3-204ENST00000553840 ZNF697Q5TEC3 545 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 KCNV1Q6PIU1 500 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 Q7L0L9 218 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 SPZ1Q9BXG8 430 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 HIPK3Q9H422 1215 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 MYH7BA7E2Y1 1941 aa20.5■□□□□ 0.87
FOXN3-204ENST00000553840 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
FOXN3-204ENST00000553840 B4GALT4O60513 344 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 ARIH2O95376 493 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 MYCLP12524 364 aaPredicted RBP20.49■□□□□ 0.87
FOXN3-204ENST00000553840 HOXA13P31271 388 aaPredicted RBP20.49■□□□□ 0.87
FOXN3-204ENST00000553840 EPHB4P54760 987 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 LY6KQ17RY6 165 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 FAM47CQ5HY64 1035 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 SKAP1Q86WV1 359 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 TRPV6Q9H1D0 765 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
FOXN3-204ENST00000553840 MTMR10Q9NXD2 777 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 MRVI1Q9Y6F6 885 aa20.49■□□□□ 0.87
FOXN3-204ENST00000553840 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 CSF2RAP15509 400 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 SLC35G1Q2M3R5 365 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 PSRC1Q6PGN9 363 aaPredicted RBP20.48■□□□□ 0.87
FOXN3-204ENST00000553840 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 PIBF1Q8WXW3 757 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 PDCD2LQ9BRP1 358 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 MYL10Q9BUA6 226 aa20.48■□□□□ 0.87
FOXN3-204ENST00000553840 CASTP20810 708 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms