RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 TRIM60Q495X7 471 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 NSUN6Q8TEA1 469 aaKnown RBP16.46■□□□□ 0.23
PRKCH-207ENST00000553831 WDR11Q9BZH6 1224 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 SEC63Q9UGP8 760 aaKnown RBP16.46■□□□□ 0.23
PRKCH-207ENST00000553831 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 KLF18A0A0U1RQI7 1052 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 DYNC1LI2O43237 492 aaPredicted RBP16.45■□□□□ 0.22
PRKCH-207ENST00000553831 ZBTB43O43298 467 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 ASGR1P07306 291 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 EIF2AK2P19525 551 aaKnown RBP16.45■□□□□ 0.22
PRKCH-207ENST00000553831 DUSP28Q4G0W2 176 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 ARHGEF16Q5VV41 709 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 BLOC1S2Q6QNY1 142 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 PCSK9Q8NBP7 692 aaKnown RBP16.45■□□□□ 0.22
PRKCH-207ENST00000553831 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 AP5M1Q9H0R1 490 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 STARD7Q9NQZ5 370 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
PRKCH-207ENST00000553831 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 GOLGA8AA7E2F4 631 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 GOLGA8BA8MQT2 603 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 GCOM1H8Y6P7 765 aaPredicted RBP16.44■□□□□ 0.22
PRKCH-207ENST00000553831 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
PRKCH-207ENST00000553831 RPS6KB1P23443 525 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 FGD1P98174 961 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 PPP2R5BQ15173 497 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
PRKCH-207ENST00000553831 RTN1Q16799 776 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 C1orf53Q5VUE5 145 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 Q6ZUG5 572 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 SCFD2Q8WU76 684 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 IWS1Q96ST2 819 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 PRO3102Q9H379 93 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 RBM28Q9NW13 759 aaKnown RBP16.44■□□□□ 0.22
PRKCH-207ENST00000553831 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
PRKCH-207ENST00000553831 Q9Y3F1 56 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
PRKCH-207ENST00000553831 PSMA5P28066 241 aa16.43■□□□□ 0.22
PRKCH-207ENST00000553831 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
PRKCH-207ENST00000553831 STXBP2Q15833 593 aa16.43■□□□□ 0.22
PRKCH-207ENST00000553831 HABP4Q5JVS0 413 aaKnown RBP16.43■□□□□ 0.22
PRKCH-207ENST00000553831 SAMD3Q8N6K7 520 aa16.43■□□□□ 0.22
PRKCH-207ENST00000553831 GLT1D1Q96MS3 346 aa16.43■□□□□ 0.22
PRKCH-207ENST00000553831 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
PRKCH-207ENST00000553831 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
PRKCH-207ENST00000553831 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
PRKCH-207ENST00000553831 ARIH2O95376 493 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 NR3C2P08235 984 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 MAGEA10P43363 369 aaPredicted RBP16.42■□□□□ 0.22
PRKCH-207ENST00000553831 RCAN1P53805 252 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 TLE2Q04725 743 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 TTLL4Q14679 1199 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 SEPT14Q6ZU15 432 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 FCHSD1Q86WN1 690 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 OR6J1Q8NGC5 347 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 IL31RAQ8NI17 732 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 COPS5Q92905 334 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 BRF1Q92994 677 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 GDF15Q99988 308 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 PDLIM7Q9NR12 457 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
PRKCH-207ENST00000553831 ELP1O95163 1332 aa16.42■□□□□ 0.22
PRKCH-207ENST00000553831 NKRFO15226 690 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRKCH-207ENST00000553831 PQBP1O60828 265 aaKnown RBP16.41■□□□□ 0.22
PRKCH-207ENST00000553831 TXNP10599 105 aaKnown RBP16.41■□□□□ 0.22
PRKCH-207ENST00000553831 CDC27P30260 824 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 FUT2Q10981 343 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 PGM5Q15124 567 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 CXCL17Q6UXB2 119 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 VTI1AQ96AJ9 217 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 PRDM5Q9NQX1 630 aaPredicted RBP16.41■□□□□ 0.22
PRKCH-207ENST00000553831 LAMA3Q16787 3333 aa16.41■□□□□ 0.22
PRKCH-207ENST00000553831 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
PRKCH-207ENST00000553831 ZEB2O60315 1214 aa16.4■□□□□ 0.22
PRKCH-207ENST00000553831 EIF3JO75822 258 aaKnown RBP16.4■□□□□ 0.22
PRKCH-207ENST00000553831 MYCLP12524 364 aaPredicted RBP16.4■□□□□ 0.22
PRKCH-207ENST00000553831 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRKCH-207ENST00000553831 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
PRKCH-207ENST00000553831 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
PRKCH-207ENST00000553831 HEATR3Q7Z4Q2 680 aa16.4■□□□□ 0.22
PRKCH-207ENST00000553831 FBXL16Q8N461 479 aa16.4■□□□□ 0.22
PRKCH-207ENST00000553831 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.22
PRKCH-207ENST00000553831 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
PRKCH-207ENST00000553831 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
PRKCH-207ENST00000553831 NID2Q14112 1375 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 CCND2P30279 289 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 CPT1AP50416 773 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 LY6KQ17RY6 165 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 ANKRD33Q7Z3H0 272 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 SH3RF1Q7Z6J0 888 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 CUL5Q93034 780 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
PRKCH-207ENST00000553831 KIAA1217Q5T5P2 1943 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms