RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 SLKQ9H2G2 1235 aaPredicted RBP13.44□□□□□ -0.26
PSMC6-204ENST00000553798 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
PSMC6-204ENST00000553798 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
PSMC6-204ENST00000553798 OGDHLQ9ULD0 1010 aa13.44□□□□□ -0.26
PSMC6-204ENST00000553798 MCM3APO60318 1980 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 B4DLN1 442 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 MEIS2O14770 477 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 SCG2P13521 617 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
PSMC6-204ENST00000553798 MRPL12P52815 198 aaKnown RBP13.43□□□□□ -0.26
PSMC6-204ENST00000553798 SCRN1Q12765 414 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 ME3Q16798 604 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
PSMC6-204ENST00000553798 HEATR3Q7Z4Q2 680 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 PHKBQ93100 1093 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 RMDN3Q96TC7 470 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 MPHOSPH6Q99547 160 aaKnown RBP13.43□□□□□ -0.26
PSMC6-204ENST00000553798 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
PSMC6-204ENST00000553798 STXBP3O00186 592 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 CPLX1O14810 134 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
PSMC6-204ENST00000553798 STK3Q13188 491 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.264e-7■■■■■ 29.5
PSMC6-204ENST00000553798 VTA1Q9NP79 307 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 PXMP2Q9NR77 195 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 FAM184BQ9ULE4 1060 aa13.42□□□□□ -0.26
PSMC6-204ENST00000553798 FRMPD4Q14CM0 1322 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
PSMC6-204ENST00000553798 ESYT2A0FGR8 921 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 CDKL5O76039 1030 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 TFRCP02786 760 aaKnown RBP13.41□□□□□ -0.26
PSMC6-204ENST00000553798 AKR1A1P14550 325 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 CNGA1P29973 690 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
PSMC6-204ENST00000553798 SSRP1Q08945 709 aaKnown RBP13.41□□□□□ -0.26
PSMC6-204ENST00000553798 ARHGEF16Q5VV41 709 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 TAPT1Q6NXT6 567 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 FAM177A1Q8N128 213 aaPredicted RBP13.41□□□□□ -0.26
PSMC6-204ENST00000553798 ANKLE1Q8NAG6 615 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 CUL5Q93034 780 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 GTF3C6Q969F1 213 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 PDCD2LQ9BRP1 358 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 SLC26A6Q9BXS9 759 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 GLT8D2Q9H1C3 349 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 RIC8AQ9NPQ8 531 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 SH3GLB2Q9NR46 395 aa13.41□□□□□ -0.26
PSMC6-204ENST00000553798 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
PSMC6-204ENST00000553798 DEXIO95424 95 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 LARGE1O95461 756 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 CTDNEP1O95476 244 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 NR3C2P08235 984 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
PSMC6-204ENST00000553798 NAPAP54920 295 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 NKX3-2P78367 333 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 PDE4DQ08499 809 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 CCDC144BQ3MJ40 725 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 IQSEC1Q6DN90 963 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 VSIG10LQ86VR7 867 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
PSMC6-204ENST00000553798 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
PSMC6-204ENST00000553798 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
PSMC6-204ENST00000553798 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 ST18O60284 1047 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
PSMC6-204ENST00000553798 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
PSMC6-204ENST00000553798 RARBP10826 455 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
PSMC6-204ENST00000553798 PGM5Q15124 567 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 STXBP2Q15833 593 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 XRRA1Q6P2D8 792 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 SMARCC2Q8TAQ2 1214 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 CCDC12Q8WUD4 166 aaPredicted RBP13.39□□□□□ -0.27
PSMC6-204ENST00000553798 BRCA2P51587 3418 aa13.39□□□□□ -0.27
PSMC6-204ENST00000553798 ADCY6O43306 1168 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 PPFIA3O75145 1194 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 FOSP01100 380 aaPredicted RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 ADCYAP1R1P41586 468 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 ADCY7P51828 1080 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 ST3GAL1Q11201 340 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 EEPD1Q7L9B9 569 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 FBXO16Q8IX29 292 aaPredicted RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 PDGFCQ9NRA1 345 aa13.38□□□□□ -0.27
PSMC6-204ENST00000553798 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 GNEQ9Y223 722 aaKnown RBP13.38□□□□□ -0.27
PSMC6-204ENST00000553798 Q9Y3F1 56 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms