RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GPR27Q9NS67 375 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 TRAV20A0A0B4J274 112 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 NUDT19A8MXV4 375 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 H7BY64 318 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 IRS4O14654 1257 aaPredicted RBP5.16□□□□□ -1.58
VRK1-202ENST00000553683 PPP1R11O60927 126 aaPredicted RBP5.16□□□□□ -1.58
VRK1-202ENST00000553683 ECI1P42126 302 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 KCNJ6P48051 423 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 WWC2Q6AWC2 1192 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 NPM2Q86SE8 214 aaKnown RBP5.16□□□□□ -1.58
VRK1-202ENST00000553683 AMIGO3Q86WK7 504 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 DCP2Q8IU60 420 aaKnown RBP5.16□□□□□ -1.58
VRK1-202ENST00000553683 PPIL6Q8IXY8 311 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 TMEM145Q8NBT3 493 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 MZB1Q8WU39 189 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 CPA5Q8WXQ8 436 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 DPF3Q92784 378 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 SIGLEC10Q96LC7 697 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 SPATA9Q9BWV2 254 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 ARHGEF4Q9NR80 690 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 SMG5Q9UPR3 1016 aaKnown RBP5.16□□□□□ -1.58
VRK1-202ENST00000553683 PCDHA5Q9Y5H7 936 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 X6R8D5 127 aa5.16□□□□□ -1.58
VRK1-202ENST00000553683 F8W031 263 aaPredicted RBP5.15□□□□□ -1.59
VRK1-202ENST00000553683 RFXAPO00287 272 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 DLX3O60479 287 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 PFKLP17858 780 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 JAG1P78504 1218 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 LSAMPQ13449 338 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 ZNF124Q15973 351 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 INF2Q27J81 1249 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 MTERF2Q49AM1 385 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 ZNF385BQ569K4 471 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 MBLAC2Q68D91 279 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 TMC6Q7Z403 805 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 LDHDQ86WU2 507 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 CCDC103Q8IW40 242 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 TMEM151BQ8IW70 566 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 SCUBE1Q8IWY4 988 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 JMYQ8N9B5 988 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 USP33Q8TEY7 942 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 DCAF4Q8WV16 495 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 IER2Q9BTL4 223 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 LGR4Q9BXB1 951 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 PCDH18Q9HCL0 1135 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 GULP1Q9UBP9 304 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 RWDD3Q9Y3V2 267 aa5.15□□□□□ -1.59
VRK1-202ENST00000553683 ARID1BQ8NFD5 2236 aaPredicted RBP5.15□□□□□ -1.59
VRK1-202ENST00000553683 CCDC163A0A0D9SF12 145 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 ARNTLO00327 626 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 PABPC1P11940 636 aaKnown RBP5.14□□□□□ -1.59
VRK1-202ENST00000553683 NCAM1P13591 858 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 SDHBP21912 280 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 FBLN1P23142 703 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 IGFBP6P24592 240 aaPredicted RBP5.14□□□□□ -1.59
VRK1-202ENST00000553683 GRIA2P42262 883 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 LINC00310P59036 64 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 PRR5P85299 388 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 IFRD2Q12894 506 aaPredicted RBP5.14□□□□□ -1.59
VRK1-202ENST00000553683 RASA3Q14644 834 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 SF1Q15637 639 aaKnown RBP5.14□□□□□ -1.59
VRK1-202ENST00000553683 CHRNA2Q15822 529 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 DENND5AQ6IQ26 1287 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 NSMFQ6X4W1 530 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
VRK1-202ENST00000553683 RCBTB1Q8NDN9 531 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 SEC14L1Q92503 715 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 UBXN4Q92575 508 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 DRC1Q96MC2 740 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 AP5M1Q9H0R1 490 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 KCNK12Q9HB15 430 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 DBR1Q9UK59 544 aaKnown RBP5.14□□□□□ -1.59
VRK1-202ENST00000553683 IRAK3Q9Y616 596 aa5.14□□□□□ -1.59
VRK1-202ENST00000553683 C22orf46C9J442 243 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 NPIPB6E9PJ23 425 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 ADCY3O60266 1144 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 FUCA1P04066 466 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 CDR1P51861 262 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 FZD5Q13467 585 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 CIAPIN1Q6FI81 312 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 CYP4F22Q6NT55 531 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 IGDCC3Q8IVU1 814 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 NLGN1Q8N2Q7 840 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 OSBP2Q969R2 916 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 TMEM169Q96HH4 297 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 DEPDC7Q96QD5 511 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 NGRNQ9NPE2 291 aaKnown RBP5.13□□□□□ -1.59
VRK1-202ENST00000553683 MARCH2Q9P0N8 246 aa5.13□□□□□ -1.59
VRK1-202ENST00000553683 TMEFF2Q9UIK5 374 aaPredicted RBP5.13□□□□□ -1.59
VRK1-202ENST00000553683 CNOT6Q9ULM6 557 aaKnown RBP5.13□□□□□ -1.59
VRK1-202ENST00000553683 ZC3H12DA2A288 527 aaKnown RBP5.12□□□□□ -1.59
VRK1-202ENST00000553683 NTRK1P04629 796 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 NAT1P18440 290 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 TACR1P25103 407 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 CFPP27918 469 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 SSRP1Q08945 709 aaKnown RBP5.12□□□□□ -1.59
VRK1-202ENST00000553683 NFE2L2Q16236 605 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 PRSS53Q2L4Q9 553 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 EMC4Q5J8M3 183 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms