RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 AENQ8WTP8 325 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 NFAT5O94916 1531 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 LTN1O94822 1766 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 A6NNZ2 444 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 PFKFB3Q16875 520 aaPredicted RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 TUBB8Q3ZCM7 444 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 SUSD4Q5VX71 490 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 TTI2Q6NXR4 508 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 MMGT1Q8N4V1 131 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 DPH5Q9H2P9 285 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 HGSO14964 777 aaPredicted RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 GLI1P08151 1106 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 RPSAP08865 295 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 RPS6KA1Q15418 735 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 NAA35Q5VZE5 725 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 GEMIN8Q9NWZ8 242 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 BAIAP2L1Q9UHR4 511 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 ADAMTS3O15072 1205 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 PPP1R37O75864 691 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 ZNF473Q8WTR7 871 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 ZNF512BQ96KM6 892 aaPredicted RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 GOLPH3Q9H4A6 298 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 EZRP15311 586 aaKnown RBP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 GIMAP8Q8ND71 665 aaPredicted RBP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 UHMK1Q8TAS1 419 aaKnown RBP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 USP17L8P0C7I0 530 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 TNNI2P48788 182 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 NAA25Q14CX7 972 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 DDX42Q86XP3 938 aaKnown RBP eCLIP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 TBC1D31Q96DN5 1066 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 USP17L3A6NCW0 530 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 USP17L4A6NCW7 530 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 SMCO2A6NFE2 343 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 GNAQP50148 359 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 USP17L1Q7RTZ2 530 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 SNX29Q8TEQ0 813 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 TRIM9Q9C026 710 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 YY1AP1Q9H869 796 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 PNPLA7Q6ZV29 1317 aa12.78□□□□□ -0.36
PPFIA2-227ENST00000552948 ZNF263O14978 683 aa12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 EPHB6O15197 1021 aa12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 RHOBTB3O94955 611 aa12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 MAN2A1Q16706 1144 aa12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 KRT79Q5XKE5 535 aa12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 C6orf50Q9HD87 102 aa12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 NOVA2Q9UNW9 492 aaKnown RBP12.77□□□□□ -0.36
PPFIA2-227ENST00000552948 TMOD1P28289 359 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 RCAN1P53805 252 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 MTMR8Q96EF0 704 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 RAB34Q9BZG1 259 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 EPN3Q9H201 632 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
PPFIA2-227ENST00000552948 KCNB1Q14721 858 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 TRADDQ15628 312 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 DNAAF5Q86Y56 855 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 CACNA2D3Q8IZS8 1091 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 DYDC1Q8WWB3 177 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 FECHP22830 423 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 ATP6V1G3Q96LB4 118 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 KLC4Q9NSK0 619 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 MEA1Q16626 185 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
PPFIA2-227ENST00000552948 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1983.8 ms