RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CCT2P78371 535 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 NTRK3Q16288 839 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 PFKFB3Q16875 520 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 PRAMEF19Q5SWL8 479 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 UBE2Q1Q7Z7E8 422 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 NSUN6Q8TEA1 469 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 KIF2CQ99661 725 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 PXMP2Q9NR77 195 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 TPCN1Q9ULQ1 816 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 STXBP3O00186 592 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 CPLX1O14810 134 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 PFKFB2O60825 505 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 TFRCP02786 760 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 RARBP10826 455 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 HOXA13P31271 388 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 NAPAP54920 295 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 PDE4DQ08499 809 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 CCDC144BQ3MJ40 725 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 CUL5Q93034 780 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 TBC1D32Q96NH3 1257 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 FAM184BQ9ULE4 1060 aa13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-209ENST00000552896 MEIS2O14770 477 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 CDKL5O76039 1030 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 AKAP17AQ02040 695 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 SCRN1Q12765 414 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 STK3Q13188 491 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 RABEP1Q15276 862 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 CPLX2Q6PUV4 134 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 TRIM22Q8IYM9 498 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 PIP4P2Q8N4L2 257 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 CCDC12Q8WUD4 166 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 PHKBQ93100 1093 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 TAAR1Q96RJ0 339 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 LARP6Q9BRS8 491 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 DDX49Q9Y6V7 483 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-209ENST00000552896 STK36Q9NRP7 1315 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 SYNRGQ9UMZ2 1314 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 ESYT2A0FGR8 921 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 DNM1LO00429 736 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 ADCY6O43306 1168 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 DUSP11O75319 330 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 EIF2AK2P19525 551 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 ADCY7P51828 1080 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 PKN1Q16512 942 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 TAPT1Q6NXT6 567 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 GTF3C6Q969F1 213 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 LENG1Q96BZ8 264 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 PDCD2LQ9BRP1 358 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 UPF3AQ9H1J1 476 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 RIC8AQ9NPQ8 531 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 SCN10AQ9Y5Y9 1956 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
TRAFD1-209ENST00000552896 CEP290O15078 2479 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 RBM47A0AV96 593 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 KBTBD13C9JR72 458 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 ADAMTS4O75173 837 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 LARGE1O95461 756 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 NR3C2P08235 984 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 CST5P28325 142 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 CCND2P30279 289 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 ADCYAP1R1P41586 468 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 TNFAIP2Q03169 654 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 SSRP1Q08945 709 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 PGM5Q15124 567 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 STXBP2Q15833 593 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 ME3Q16798 604 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 ANO1Q5XXA6 986 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 EEPD1Q7L9B9 569 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 CCDC148Q8NFR7 591 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 DIS3LQ8TF46 1054 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 SCFD2Q8WU76 684 aa13.46□□□□□ -0.25
TRAFD1-209ENST00000552896 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 DEXIO95424 95 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 COL6A1P12109 1028 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 NKX3-2P78367 333 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms