RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DEFB118Q96PH6 123 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 AP5M1Q9H0R1 490 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 UNC93B1Q9H1C4 597 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CPVLQ9H3G5 476 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 OGDHLQ9ULD0 1010 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CNTNAP5Q8WYK1 1306 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 KPNA6O60684 536 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 SEC24BO95487 1268 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 EDNRBP24530 442 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 AK2P54819 239 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 TRIM29Q14134 588 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 NECAB2Q7Z6G3 386 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 TSEN34Q9BSV6 310 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 BAZ2BQ9UIF8 2168 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-208ENST00000552890 PLXNA1Q9UIW2 1896 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 DNM1LO00429 736 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 CABYRO75952 493 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 NR3C2P08235 984 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 CDC27P30260 824 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 CCT2P78371 535 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 TNFAIP2Q03169 654 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 FUT2Q10981 343 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 MTFR1Q15390 333 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 NLRX1Q86UT6 975 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 NAP1L4Q99733 375 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 SLC26A6Q9BXS9 759 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 ZMYND12Q9H0C1 365 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 XPNPEP3Q9NQH7 507 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
TRAFD1-208ENST00000552890 RBM47A0AV96 593 aaKnown RBP11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 FARP2O94887 1054 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 ZNF865P0CJ78 1059 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 CPT1AP50416 773 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 SAFBQ15424 915 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 NTRK3Q16288 839 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 CCDC144BQ3MJ40 725 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 PCNX4Q63HM2 1172 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 SLC30A10Q6XR72 485 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 WDR11Q9BZH6 1224 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-208ENST00000552890 RBBP6Q7Z6E9 1792 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 STXBP3O00186 592 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 PPP1R11O60927 126 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 CST5P28325 142 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 NLRP5P59047 1200 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 NKX3-2P78367 333 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 NEDD9Q14511 834 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 LHX8Q68G74 356 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 FCHSD1Q86WN1 690 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 PDCD2LQ9BRP1 358 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
TRAFD1-208ENST00000552890 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 MEIS2O14770 477 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 EIF2AK2P19525 551 aaKnown RBP11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 GJA9P57773 515 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 SCRN1Q12765 414 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 STK3Q13188 491 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 PGM5Q15124 567 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 RAB11FIP4Q86YS3 637 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 PHKBQ93100 1093 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 GPRASP2Q96D09 838 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 TAAR1Q96RJ0 339 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 SENP7Q9BQF6 1050 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 NR2E3Q9Y5X4 410 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
TRAFD1-208ENST00000552890 FIBPO43427 364 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 ELP1O95163 1332 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 GH1P01241 217 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 TXNP10599 105 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms