RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 VTA1Q9NP79 307 aa11.35□□□□□ -0.59
PFDN5-218ENST00000552742 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
PFDN5-218ENST00000552742 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
PFDN5-218ENST00000552742 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 B4DLN1 442 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 DNM1LO00429 736 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 PPFIA3O75145 1194 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 NR3C2P08235 984 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 SMPD1P17405 629 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 USP17L6PQ6QN14 398 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 SAMD3Q8N6K7 520 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 HTATIP2Q9BUP3 242 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 PSTPIP2Q9H939 334 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
PFDN5-218ENST00000552742 SYNRGQ9UMZ2 1314 aa11.34□□□□□ -0.59
PFDN5-218ENST00000552742 LRRC37A2A6NM11 1700 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 MYADML2A6NDP7 307 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 KBTBD13C9JR72 458 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 DYNC1LI2O43237 492 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 MYCLP12524 364 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 GJA9P57773 515 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 STK3Q13188 491 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 STXBP2Q15833 593 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 NTRK3Q16288 839 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 KCNA10Q16322 511 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 WWC2Q6AWC2 1192 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 RNF180Q86T96 592 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 PHKBQ93100 1093 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
PFDN5-218ENST00000552742 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 UPF3AQ9H1J1 476 aaKnown RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
PFDN5-218ENST00000552742 MEIS2O14770 477 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 CTAGE5O15320 804 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 PRPF3O43395 683 aaKnown RBP11.32□□□□□ -0.6
PFDN5-218ENST00000552742 EIF3JO75822 258 aaKnown RBP11.32□□□□□ -0.6
PFDN5-218ENST00000552742 NEK4P51957 841 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 BEX3Q00994 111 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 LRRC26Q2I0M4 334 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 DUSP28Q4G0W2 176 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 CCSAPQ6IQ19 270 aaPredicted RBP11.32□□□□□ -0.6
PFDN5-218ENST00000552742 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 CUL5Q93034 780 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
PFDN5-218ENST00000552742 NID2Q14112 1375 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 H0YGN5 161 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 STXBP3O00186 592 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 PIK3CDO00329 1044 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 EVI5O60447 810 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
PFDN5-218ENST00000552742 IFNAR1P17181 557 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 ACLYP53396 1101 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 AK2P54819 239 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 NAPAP54920 295 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 PGM5Q15124 567 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 PKN1Q16512 942 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 UBE2SQ16763 222 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 CCDC62Q6P9F0 684 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 TLK2Q86UE8 772 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 SCFD2Q8WU76 684 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 COPS5Q92905 334 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
PFDN5-218ENST00000552742 SLC26A6Q9BXS9 759 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 SPC25Q9HBM1 224 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 TPCN1Q9ULQ1 816 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
PFDN5-218ENST00000552742 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 SMCO2A6NFE2 343 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 DTNBO60941 627 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 RGS20O76081 388 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 ARIH2O95376 493 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 ASGR1P07306 291 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 SCG2P13521 617 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 CCND2P30279 289 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 AKAP17AQ02040 695 aaKnown RBP11.3□□□□□ -0.6
PFDN5-218ENST00000552742 TTLL4Q14679 1199 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms