RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 ABCB11O95342 1321 aa18.89■□□□□ 0.61
CALCOCO1-220ENST00000552282 MYO9BQ13459 2157 aa18.89■□□□□ 0.61
CALCOCO1-220ENST00000552282 XIRP2A4UGR9 3374 aa18.88■□□□□ 0.61
CALCOCO1-220ENST00000552282 CALML3P27482 149 aa18.88■□□□□ 0.61
CALCOCO1-220ENST00000552282 CCDC62Q6P9F0 684 aa18.88■□□□□ 0.61
CALCOCO1-220ENST00000552282 RILPL2Q969X0 211 aa18.88■□□□□ 0.61
CALCOCO1-220ENST00000552282 GAS2L1Q99501 681 aaPredicted RBP18.88■□□□□ 0.61
CALCOCO1-220ENST00000552282 CCL23P55773 120 aa18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 SCN5AQ14524 2016 aa18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 CDC37Q16543 378 aaPredicted RBP18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 SESTD1Q86VW0 696 aa18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 ENAHQ8N8S7 591 aaPredicted RBP18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 TRMT13Q9NUP7 481 aaKnown RBP18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 PCDHA11Q9Y5I1 949 aa18.87■□□□□ 0.61
CALCOCO1-220ENST00000552282 NCOR1O75376 2440 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 KDM4AO75164 1064 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 RBL2Q08999 1139 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 TTLL4Q14679 1199 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 TJAP1Q5JTD0 557 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 OTOP2Q7RTS6 562 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 EMID1Q96A84 441 aaPredicted RBP18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 IWS1Q96ST2 819 aa18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 ZSCAN10Q96SZ4 725 aaPredicted RBP18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 YBX2Q9Y2T7 364 aaKnown RBP18.86■□□□□ 0.61
CALCOCO1-220ENST00000552282 ARIH2O95376 493 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 ADGRE1Q14246 886 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 NBPF20Q3BBV1 942 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 ADGRF4Q8IZF3 695 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 SYTL5Q8TDW5 730 aaPredicted RBP18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 PRDM12Q9H4Q4 367 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 KAT14Q9H8E8 782 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 CNNM2Q9H8M5 875 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 SLC28A3Q9HAS3 691 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 DIAPH3Q9NSV4 1193 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 CTNNA3Q9UI47 895 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 SLC4A7Q9Y6M7 1214 aa18.85■□□□□ 0.61
CALCOCO1-220ENST00000552282 IGHDP01880 384 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 MYL3P08590 195 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 GOLGA8HP0CJ92 632 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 TXNP10599 105 aaKnown RBP18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 CYP2C9P11712 490 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 IMMTQ16891 758 aaKnown RBP18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 CWC27Q6UX04 472 aaKnown RBP18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 MCF2L2Q86YR7 1114 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 SAMD3Q8N6K7 520 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 NSUN6Q8TEA1 469 aaKnown RBP18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 SCLYQ96I15 445 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 KRT23Q9C075 422 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 UBA5Q9GZZ9 404 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 MAP3K20Q9NYL2 800 aaKnown RBP18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 BDP1A6H8Y1 2624 aa18.84■□□□□ 0.61
CALCOCO1-220ENST00000552282 B4E1Z4 1266 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 POU3F3P20264 500 aaPredicted RBP18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 ARHGAP1Q07960 439 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 QRICH1Q2TAL8 776 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 USH1GQ495M9 461 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 PHOSPHO2Q8TCD6 241 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 COPS5Q92905 334 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 SLC9A7Q96T83 725 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 NKX2-4Q9H2Z4 354 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 COL20A1Q9P218 1284 aa18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 MRPL11Q9Y3B7 192 aaKnown RBP18.83■□□□□ 0.6
CALCOCO1-220ENST00000552282 TET1Q8NFU7 2136 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 GH1P01241 217 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 MMP3P08254 477 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 IQCF3P0C7M6 154 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 HOXD8P13378 290 aaPredicted RBP18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 ATP2A2P16615 1042 aaKnown RBP18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 HSD17B4P51659 736 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 SEC23AQ15436 765 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 CAGE1Q8TC20 777 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 JMJD4Q9H9V9 463 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 PTPRSQ13332 1948 aa18.82■□□□□ 0.6
CALCOCO1-220ENST00000552282 OPLAHO14841 1288 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 BAIAP3O94812 1187 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 PARNO95453 639 aaKnown RBP18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 PARP1P09874 1014 aaKnown RBP18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 ACTN1P12814 892 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 BFSP2Q13515 415 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 STXBP2Q15833 593 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 B4GALNT3Q6L9W6 998 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 FBXO11Q86XK2 927 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 RMDN3Q96TC7 470 aa18.81■□□□□ 0.6
CALCOCO1-220ENST00000552282 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
CALCOCO1-220ENST00000552282 CCDC155Q8N6L0 562 aa18.8■□□□□ 0.6
CALCOCO1-220ENST00000552282 AFAP1L1Q8TED9 768 aa18.8■□□□□ 0.6
CALCOCO1-220ENST00000552282 KAT2BQ92831 832 aa18.8■□□□□ 0.6
CALCOCO1-220ENST00000552282 EIF3JO75822 258 aaKnown RBP18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 F2P00734 622 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 FAM47CQ5HY64 1035 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms