RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PDIA3P30101 505 aaKnown RBP20■□□□□ 0.79
CDK4-208ENST00000551706 CDC27P30260 824 aa20■□□□□ 0.79
CDK4-208ENST00000551706 PRAMEF19Q5SWL8 479 aa20■□□□□ 0.79
CDK4-208ENST00000551706 SEMA6BQ9H3T3 888 aa20■□□□□ 0.79
CDK4-208ENST00000551706 CNTNAP5Q8WYK1 1306 aa20■□□□□ 0.79
CDK4-208ENST00000551706 MUC3AQ02505 3323 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 PLXNA1Q9UIW2 1896 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 CFBP00751 764 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 ADD1P35611 737 aaKnown RBP19.99■□□□□ 0.79
CDK4-208ENST00000551706 ALDH5A1P51649 535 aaPredicted RBP19.99■□□□□ 0.79
CDK4-208ENST00000551706 HSD17B4P51659 736 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 FUT2Q10981 343 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 SYTL5Q8TDW5 730 aaPredicted RBP19.99■□□□□ 0.79
CDK4-208ENST00000551706 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 ASTN1O14525 1302 aa19.99■□□□□ 0.79
CDK4-208ENST00000551706 GCOM1H8Y6P7 765 aaPredicted RBP19.98■□□□□ 0.79
CDK4-208ENST00000551706 OPLAHO14841 1288 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 POLR2MP0CAP2 368 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 ZNF865P0CJ78 1059 aaPredicted RBP19.98■□□□□ 0.79
CDK4-208ENST00000551706 AKR1A1P14550 325 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 ACVR2BQ13705 512 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 LHX8Q68G74 356 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 MORC4Q8TE76 937 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 TBC1D5Q92609 795 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 PURBQ96QR8 312 aaKnown RBP19.98■□□□□ 0.79
CDK4-208ENST00000551706 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
CDK4-208ENST00000551706 CDH23Q9H251 3354 aa19.98■□□□□ 0.79
CDK4-208ENST00000551706 SMCHD1A6NHR9 2005 aa19.97■□□□□ 0.79
CDK4-208ENST00000551706 hCG_1984214I3L0E3 225 aa19.97■□□□□ 0.79
CDK4-208ENST00000551706 ZNF713Q8N859 430 aaPredicted RBP19.97■□□□□ 0.79
CDK4-208ENST00000551706 NSUN6Q8TEA1 469 aaKnown RBP19.97■□□□□ 0.79
CDK4-208ENST00000551706 MYLIPQ8WY64 445 aa19.97■□□□□ 0.79
CDK4-208ENST00000551706 FAM184BQ9ULE4 1060 aa19.97■□□□□ 0.79
CDK4-208ENST00000551706 V9GY48 417 aaPredicted RBP19.97■□□□□ 0.79
CDK4-208ENST00000551706 RARBP10826 455 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 RBM25P49756 843 aaKnown RBP19.96■□□□□ 0.79
CDK4-208ENST00000551706 NEK4P51957 841 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 AKAP17AQ02040 695 aaKnown RBP19.96■□□□□ 0.79
CDK4-208ENST00000551706 PDE4DQ08499 809 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 CPLX2Q6PUV4 134 aaKnown RBP19.96■□□□□ 0.79
CDK4-208ENST00000551706 HEATR3Q7Z4Q2 680 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 TEX2Q8IWB9 1127 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 CUL5Q93034 780 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 IWS1Q96ST2 819 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 RMDN3Q96TC7 470 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 VTA1Q9NP79 307 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 PRKAG2Q9UGJ0 569 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 MYH6P13533 1939 aa19.96■□□□□ 0.79
CDK4-208ENST00000551706 hCG_1642624A0A1W2PR95 340 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 IFNAR1P17181 557 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 EDNRBP24530 442 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 AK2P54819 239 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 CCT2P78371 535 aaKnown RBP19.95■□□□□ 0.78
CDK4-208ENST00000551706 PPP1R18Q6NYC8 613 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 SENP6Q9GZR1 1112 aaPredicted RBP19.95■□□□□ 0.78
CDK4-208ENST00000551706 KATNBL1Q9H079 304 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 COL20A1Q9P218 1284 aa19.95■□□□□ 0.78
CDK4-208ENST00000551706 BAZ2BQ9UIF8 2168 aaKnown RBP19.95■□□□□ 0.78
CDK4-208ENST00000551706 TNFRSF10AO00220 468 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 PIK3CDO00329 1044 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 CPLX1O14810 134 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
CDK4-208ENST00000551706 FOSL2P15408 326 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 NTRK3Q16288 839 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 CCDC144BQ3MJ40 725 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 ARHGEF16Q5VV41 709 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 ARRDC4Q8NCT1 418 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 TAAR1Q96RJ0 339 aa19.94■□□□□ 0.78
CDK4-208ENST00000551706 LARP6Q9BRS8 491 aaKnown RBP19.94■□□□□ 0.78
CDK4-208ENST00000551706 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
CDK4-208ENST00000551706 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
CDK4-208ENST00000551706 HOXA13P31271 388 aaPredicted RBP19.93■□□□□ 0.78
CDK4-208ENST00000551706 PFKFB3Q16875 520 aaPredicted RBP19.93■□□□□ 0.78
CDK4-208ENST00000551706 WWC2Q6AWC2 1192 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 TRIM22Q8IYM9 498 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 IL27Q8NEV9 243 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 TTYH1Q9H313 450 aaPredicted RBP19.93■□□□□ 0.78
CDK4-208ENST00000551706 PSTPIP2Q9H939 334 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 NCOA5Q9HCD5 579 aaKnown RBP19.93■□□□□ 0.78
CDK4-208ENST00000551706 PXMP2Q9NR77 195 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 BARHL2Q9NY43 387 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 TPCN1Q9ULQ1 816 aa19.93■□□□□ 0.78
CDK4-208ENST00000551706 DUSP11O75319 330 aaKnown RBP19.92■□□□□ 0.78
CDK4-208ENST00000551706 CDKL5O76039 1030 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 SCG2P13521 617 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 NAPAP54920 295 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 STK3Q13188 491 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 SHHQ15465 462 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 STXBP2Q15833 593 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 TJAP1Q5JTD0 557 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 ANO1Q5XXA6 986 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 IQSEC1Q6DN90 963 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 FBXO16Q8IX29 292 aaPredicted RBP19.92■□□□□ 0.78
CDK4-208ENST00000551706 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 CCDC12Q8WUD4 166 aaPredicted RBP19.92■□□□□ 0.78
CDK4-208ENST00000551706 GPKOWQ92917 476 aaPredicted RBP eCLIP19.92■□□□□ 0.78
CDK4-208ENST00000551706 GLT8D2Q9H1C3 349 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 XPNPEP3Q9NQH7 507 aa19.92■□□□□ 0.78
CDK4-208ENST00000551706 LTBP2Q14767 1821 aa19.91■□□□□ 0.78
CDK4-208ENST00000551706 STXBP3O00186 592 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms