RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 TRIM9Q9C026 710 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 EHMT1Q9H9B1 1298 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-206ENST00000550891 FEM1BQ9UK73 627 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-206ENST00000550891 CCT6AP40227 531 aaKnown RBP17.4■□□□□ 0.38
SCN8A-206ENST00000550891 PRCPP42785 496 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 MOXD1Q6UVY6 613 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 MMTAG2Q9BU76 263 aaKnown RBP17.4■□□□□ 0.38
SCN8A-206ENST00000550891 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-206ENST00000550891 MRPL11Q9Y3B7 192 aaKnown RBP17.4■□□□□ 0.38
SCN8A-206ENST00000550891 LTBP3Q9NS15 1303 aa17.4■□□□□ 0.38
SCN8A-206ENST00000550891 RHOBTB3O94955 611 aa17.39■□□□□ 0.38
SCN8A-206ENST00000550891 PPP1R2P41236 205 aa17.39■□□□□ 0.38
SCN8A-206ENST00000550891 KIF4BQ2VIQ3 1234 aa17.39■□□□□ 0.38
SCN8A-206ENST00000550891 SPECC1LQ69YQ0 1117 aa17.39■□□□□ 0.38
SCN8A-206ENST00000550891 CNNM4Q6P4Q7 775 aa17.39■□□□□ 0.38
SCN8A-206ENST00000550891 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.38
SCN8A-206ENST00000550891 SSBP05455 408 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCN8A-206ENST00000550891 CCDC112Q8NEF3 446 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 UIMC1Q96RL1 719 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 C7orf25Q9BPX7 421 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-206ENST00000550891 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-206ENST00000550891 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 IDEP14735 1019 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 GRB10Q13322 594 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 CCDC84Q86UT8 332 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-206ENST00000550891 ERMNQ8TAM6 284 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 MED15Q96RN5 788 aa17.39■□□□□ 0.37
SCN8A-206ENST00000550891 MCM6Q14566 821 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 DCAF15Q66K64 600 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 HAUS3Q68CZ6 603 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 HAS1Q92839 578 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 COBLO75128 1261 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 TPM1P09493 284 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 ADSSL1Q8N142 457 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 HOOK2Q96ED9 719 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 DEFB129Q9H1M3 183 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 N4BP3O15049 544 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 EGFRP00533 1210 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 SREBF1P36956 1147 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 CCZ1BP86790 482 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
SCN8A-206ENST00000550891 KIAA1755Q5JYT7 1200 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 PPFIBP1Q86W92 1011 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 TEX2Q8IWB9 1127 aa17.38■□□□□ 0.37
SCN8A-206ENST00000550891 C16orf45Q96MC5 204 aaPredicted RBP17.38■□□□□ 0.37
SCN8A-206ENST00000550891 BICDL2A1A5D9 508 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 PES1O00541 588 aaKnown RBP17.37■□□□□ 0.37
SCN8A-206ENST00000550891 EDIL3O43854 480 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 GIMAP8Q8ND71 665 aaPredicted RBP17.37■□□□□ 0.37
SCN8A-206ENST00000550891 RAD54LQ92698 747 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 GJA10Q969M2 543 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 CYP3A7-CYP3A51PA0A087WV96 503 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 TPM2P07951 284 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 TAL1P17542 331 aaPredicted RBP17.37■□□□□ 0.37
SCN8A-206ENST00000550891 CYP3A7P24462 503 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 DYMQ7RTS9 669 aa17.37■□□□□ 0.37
SCN8A-206ENST00000550891 GLIS2Q9BZE0 524 aaPredicted RBP17.37■□□□□ 0.37
SCN8A-206ENST00000550891 FZD9O00144 591 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 PTPN21Q16825 1174 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 CDKAL1Q5VV42 579 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 LPAR1Q92633 364 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 DHTKD1Q96HY7 919 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-206ENST00000550891 PNMA5Q96PV4 448 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 GINM1Q9NU53 330 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 A0A1B0GTH6 734 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 TBX3O15119 743 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 KLRC4O43908 158 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 CTNND1O60716 968 aaKnown RBP17.36■□□□□ 0.37
SCN8A-206ENST00000550891 PLA2G6O60733 806 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 RANBP17Q9H2T7 1088 aaKnown RBP17.36■□□□□ 0.37
SCN8A-206ENST00000550891 FER1L6Q2WGJ9 1857 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 FAM20AQ96MK3 541 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 FBXO28Q9NVF7 368 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
SCN8A-206ENST00000550891 KCNJ18B7U540 433 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 KCNJ12Q14500 433 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 ARHGAP27Q6ZUM4 889 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 KCNMB3Q9NPA1 279 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 BLOC1S4Q9NUP1 217 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 TRMT1Q9NXH9 659 aaKnown RBP17.35■□□□□ 0.37
SCN8A-206ENST00000550891 CCPG1Q9ULG6 757 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 ARFGEF1Q9Y6D6 1849 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 ABCB11O95342 1321 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 WDR46O15213 610 aaKnown RBP17.35■□□□□ 0.37
SCN8A-206ENST00000550891 KRT18P05783 430 aaKnown RBP17.35■□□□□ 0.37
SCN8A-206ENST00000550891 NR1I3Q14994 352 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms