RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 NECAB1Q8N987 351 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 KIF2CQ99661 725 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 VTA1Q9NP79 307 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 XPNPEP3Q9NQH7 507 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 PXMP2Q9NR77 195 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 MAP3K20Q9NYL2 800 aaKnown RBP15.82■□□□□ 0.12
TROAP-213ENST00000550709 NID2Q14112 1375 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 ADCY6O43306 1168 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 NR3C2P08235 984 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 SCG2P13521 617 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 IFNAR1P17181 557 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 RBM25P49756 843 aaKnown RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 MNX1P50219 401 aaPredicted RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 GHRHRQ02643 423 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 TNFAIP2Q03169 654 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 SSRP1Q08945 709 aaKnown RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 SCRN1Q12765 414 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 PFKFB3Q16875 520 aaPredicted RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 TMEM63BQ5T3F8 832 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 TAPT1Q6NXT6 567 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 CPLX2Q6PUV4 134 aaKnown RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 SAMD3Q8N6K7 520 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 ARRDC4Q8NCT1 418 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
TROAP-213ENST00000550709 BARHL2Q9NY43 387 aa15.81■□□□□ 0.12
TROAP-213ENST00000550709 LOC102724159A0A0B4J2E5 919 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 MEIS2O14770 477 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 PFKFB2O60825 505 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 LARGE1O95461 756 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 SMPD1P17405 629 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 PWP2Q15269 919 aaKnown RBP15.8■□□□□ 0.12
TROAP-213ENST00000550709 LRRC41Q15345 812 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 STXBP2Q15833 593 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 PKN1Q16512 942 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 ME3Q16798 604 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 NECAB2Q7Z6G3 386 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 UBE2Q1Q7Z7E8 422 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 TRIM22Q8IYM9 498 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 ANKLE1Q8NAG6 615 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 IL31RAQ8NI17 732 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 IWS1Q96ST2 819 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 PDCD2LQ9BRP1 358 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 BACH2Q9BYV9 841 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 WDR11Q9BZH6 1224 aa15.8■□□□□ 0.12
TROAP-213ENST00000550709 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
TROAP-213ENST00000550709 KBTBD13C9JR72 458 aa15.79■□□□□ 0.12
TROAP-213ENST00000550709 DYNC1LI2O43237 492 aaPredicted RBP15.79■□□□□ 0.12
TROAP-213ENST00000550709 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
TROAP-213ENST00000550709 CAPN2P17655 700 aa15.79■□□□□ 0.12
TROAP-213ENST00000550709 ADCY7P51828 1080 aa15.79■□□□□ 0.12
TROAP-213ENST00000550709 IRX5P78411 483 aaPredicted RBP15.79■□□□□ 0.12
TROAP-213ENST00000550709 IQSEC1Q6DN90 963 aa15.79■□□□□ 0.12
TROAP-213ENST00000550709 RNF26Q9BY78 433 aaPredicted RBP15.79■□□□□ 0.12
TROAP-213ENST00000550709 C11orf49Q9H6J7 331 aa15.79■□□□□ 0.12
TROAP-213ENST00000550709 RBM27Q9P2N5 1060 aaKnown RBP15.79■□□□□ 0.12
TROAP-213ENST00000550709 ZNFX1Q9P2E3 1918 aaKnown RBP15.78■□□□□ 0.12
TROAP-213ENST00000550709 SYNRGQ9UMZ2 1314 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 MYADML2A6NDP7 307 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 PIK3CDO00329 1044 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 DNM1LO00429 736 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 C6orf222P0C671 652 aaPredicted RBP15.78■□□□□ 0.12
TROAP-213ENST00000550709 PGM5Q15124 567 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 RNF180Q86T96 592 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 SCFD2Q8WU76 684 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 FERMT2Q96AC1 680 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 TBC1D32Q96NH3 1257 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 SENP6Q9GZR1 1112 aaPredicted RBP15.78■□□□□ 0.12
TROAP-213ENST00000550709 SPC25Q9HBM1 224 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 RIC8AQ9NPQ8 531 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 VPS54Q9P1Q0 977 aa15.78■□□□□ 0.12
TROAP-213ENST00000550709 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 hCG_1984214I3L0E3 225 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 ADAMTS4O75173 837 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 EIF3JO75822 258 aaKnown RBP15.77■□□□□ 0.12
TROAP-213ENST00000550709 CDKL5O76039 1030 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 TXNP10599 105 aaKnown RBP15.77■□□□□ 0.12
TROAP-213ENST00000550709 CCND2P30279 289 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 RABEP1Q15276 862 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 TLK2Q86UE8 772 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 VSIG10LQ86VR7 867 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 ZNF713Q8N859 430 aaPredicted RBP15.77■□□□□ 0.12
TROAP-213ENST00000550709 COPS5Q92905 334 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 PGBD1Q96JS3 809 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 AIFM3Q96NN9 605 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 LIMCH1Q9UPQ0 1083 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
TROAP-213ENST00000550709 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
TROAP-213ENST00000550709 RBM47A0AV96 593 aaKnown RBP15.76■□□□□ 0.11
TROAP-213ENST00000550709 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 ARIH2O95376 493 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 CTDNEP1O95476 244 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 ATN1P54259 1190 aaPredicted RBP15.76■□□□□ 0.11
TROAP-213ENST00000550709 BEX3Q00994 111 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms