RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
COX6A1-203ENST00000550009 PTPRSQ13332 1948 aa18.57■□□□□ 0.56
COX6A1-203ENST00000550009 ABCB11O95342 1321 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 GRXCR1A8MXD5 290 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 MYL3P08590 195 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 GRM4Q14833 912 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 LY6KQ17RY6 165 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 GPR153Q6NV75 609 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 SEPT14Q6ZU15 432 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 IGDCC4Q8TDY8 1250 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 VWCEQ96DN2 955 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 RNPC3Q96LT9 517 aaKnown RBP18.56■□□□□ 0.56
COX6A1-203ENST00000550009 PIGSQ96S52 555 aa18.56■□□□□ 0.56
COX6A1-203ENST00000550009 TTYH1Q9H313 450 aaPredicted RBP18.56■□□□□ 0.56
COX6A1-203ENST00000550009 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
COX6A1-203ENST00000550009 SORBS3O60504 671 aa18.55■□□□□ 0.56
COX6A1-203ENST00000550009 CFBP00751 764 aa18.55■□□□□ 0.56
COX6A1-203ENST00000550009 EIF2AK2P19525 551 aaKnown RBP18.55■□□□□ 0.56
COX6A1-203ENST00000550009 HOXA13P31271 388 aaPredicted RBP18.55■□□□□ 0.56
COX6A1-203ENST00000550009 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
COX6A1-203ENST00000550009 MFSD5Q6N075 450 aa18.55■□□□□ 0.56
COX6A1-203ENST00000550009 RAB11FIP4Q86YS3 637 aa18.55■□□□□ 0.56
COX6A1-203ENST00000550009 IL31RAQ8NI17 732 aa18.55■□□□□ 0.56
COX6A1-203ENST00000550009 TANC1Q9C0D5 1861 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 TXNP10599 105 aaKnown RBP18.54■□□□□ 0.56
COX6A1-203ENST00000550009 CYP2C9P11712 490 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 CCL23P55773 120 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 TROAPQ12815 778 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 TMEM240Q5SV17 173 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 CCDC62Q6P9F0 684 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 RGS22Q8NE09 1264 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 DNERQ8NFT8 737 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 ESYT1Q9BSJ8 1104 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 LRRC2Q9BYS8 371 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 WNT8AQ9H1J5 351 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 Q9Y3F1 56 aa18.54■□□□□ 0.56
COX6A1-203ENST00000550009 MROH7Q68CQ1 1323 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 RXRAP19793 462 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 TRDNQ13061 729 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 WTAPQ15007 396 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 PPP2R5BQ15173 497 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 GPKOWQ92917 476 aaPredicted RBP eCLIP18.53■□□□□ 0.56
COX6A1-203ENST00000550009 SCLYQ96I15 445 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 RMDN3Q96TC7 470 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 LY9Q9HBG7 655 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 VCANP13611 3396 aa18.53■□□□□ 0.56
COX6A1-203ENST00000550009 SLC27A2O14975 620 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 ZBTB5O15062 677 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 RGS20O76081 388 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 PBX2P40425 430 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 HSD17B4P51659 736 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 NBPF20Q3BBV1 942 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 ZNF365Q70YC5 407 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 RALYLQ86SE5 291 aaKnown RBP18.52■□□□□ 0.56
COX6A1-203ENST00000550009 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
COX6A1-203ENST00000550009 SCFD2Q8WU76 684 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.56
COX6A1-203ENST00000550009 AMNQ9BXJ7 453 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 ALDH8A1Q9H2A2 487 aaPredicted RBP18.52■□□□□ 0.56
COX6A1-203ENST00000550009 SEMA6BQ9H3T3 888 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 RIOX1Q9H6W3 641 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 PXMP2Q9NR77 195 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 CXXC1Q9P0U4 656 aaPredicted RBP18.52■□□□□ 0.56
COX6A1-203ENST00000550009 MRPL11Q9Y3B7 192 aaKnown RBP18.52■□□□□ 0.56
COX6A1-203ENST00000550009 PCDHA1Q9Y5I3 950 aa18.52■□□□□ 0.56
COX6A1-203ENST00000550009 NT5C2P49902 561 aa18.51■□□□□ 0.55
COX6A1-203ENST00000550009 CHMP4BP1P59074 171 aa18.51■□□□□ 0.55
COX6A1-203ENST00000550009 ARHGAP1Q07960 439 aa18.51■□□□□ 0.55
COX6A1-203ENST00000550009 HIPK3Q9H422 1215 aa18.51■□□□□ 0.55
COX6A1-203ENST00000550009 STXBP5LQ9Y2K9 1186 aa18.51■□□□□ 0.55
COX6A1-203ENST00000550009 LOC102724159A0A0B4J2E5 919 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 TLR3O15455 904 aaKnown RBP18.5■□□□□ 0.55
COX6A1-203ENST00000550009 PRC1O43663 620 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 ZEB2O60315 1214 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 CABYRO75952 493 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 PWP2Q15269 919 aaKnown RBP18.5■□□□□ 0.55
COX6A1-203ENST00000550009 ZNF697Q5TEC3 545 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 ARHGEF16Q5VV41 709 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 NSUN6Q8TEA1 469 aaKnown RBP18.5■□□□□ 0.55
COX6A1-203ENST00000550009 MYLIPQ8WY64 445 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 CDX2Q99626 313 aaPredicted RBP18.5■□□□□ 0.55
COX6A1-203ENST00000550009 PNMA2Q9UL42 364 aa18.5■□□□□ 0.55
COX6A1-203ENST00000550009 hCG_1642624A0A1W2PR95 340 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 A6NJR5 290 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 NR3C2P08235 984 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 MYCLP12524 364 aaPredicted RBP18.49■□□□□ 0.55
COX6A1-203ENST00000550009 CPT1AP50416 773 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 SMAD3P84022 425 aaKnown RBP18.49■□□□□ 0.55
COX6A1-203ENST00000550009 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 CREB3L3Q68CJ9 461 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 FCHSD1Q86WN1 690 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 SLC17A8Q8NDX2 589 aa18.49■□□□□ 0.55
COX6A1-203ENST00000550009 TCEANC2Q96MN5 208 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms