RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 DICER1Q9UPY3 1922 aaKnown RBP6.73□□□□□ -1.33
SMARCC2-207ENST00000549757 KIF7Q2M1P5 1343 aa6.73□□□□□ -1.33
SMARCC2-207ENST00000549757 LTBP3Q9NS15 1303 aa6.73□□□□□ -1.33
SMARCC2-207ENST00000549757 BCORQ6W2J9 1755 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 A1BGP04217 495 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 EIF4BP23588 611 aaKnown RBP6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 PIP4K2AP48426 406 aaPredicted RBP6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 ARL4DP49703 201 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 PCDH1Q08174 1060 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 GRM2Q14416 872 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 PI16Q6UXB8 463 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 LDHDQ86WU2 507 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 JAMLQ86YT9 394 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 IL17REQ8NFR9 667 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 RTF1Q92541 710 aaKnown RBP6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 CFAP53Q96M91 514 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 ARPC5LQ9BPX5 153 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 ZNF700Q9H0M5 742 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 CASS4Q9NQ75 786 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 MAP3K20Q9NYL2 800 aaKnown RBP6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 ATP8A1Q9Y2Q0 1164 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 MSRB2Q9Y3D2 182 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 ARFGEF2Q9Y6D5 1785 aa6.72□□□□□ -1.33
SMARCC2-207ENST00000549757 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 CAMTA2O94983 1202 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 DLGAP3O95886 979 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 KRT18P05783 430 aaKnown RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 SRGNP10124 158 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 NPR1P16066 1061 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 GLB1P16278 677 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 POU3F3P20264 500 aaPredicted RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 NASPP49321 788 aaPredicted RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 EPHB1P54762 984 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 LMOD3Q0VAK6 560 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 SQSTM1Q13501 440 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 ZRSR2Q15696 482 aaKnown RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 PRSS36Q5K4E3 855 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 PRR23CQ6ZRP0 262 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 ARMC10Q8N2F6 343 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 FAM46AQ96IP4 442 aaKnown RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 SIPA1L3O60292 1781 aaPredicted RBP6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 SLX4Q8IY92 1834 aa6.71□□□□□ -1.34
SMARCC2-207ENST00000549757 CNTNAP1P78357 1384 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 LOC100289279A0A1B0GTE1 492 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 FOXN1O15353 648 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 B3GALT4O96024 378 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 PRKAR2BP31323 418 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 EPHX2P34913 555 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 MYBPC2Q14324 1141 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 TPTE2Q6XPS3 522 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 DNAJC7Q99615 494 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 FAM126AQ9BYI3 521 aaPredicted RBP6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 CEP41Q9BYV8 373 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 RNF208Q9H0X6 261 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 TAF1DQ9H5J8 278 aaPredicted RBP6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 COPRSQ9NQ92 184 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 ZNF277Q9NRM2 450 aaPredicted RBP6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 HACL1Q9UJ83 578 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 ABT1Q9ULW3 272 aaKnown RBP6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 NIP7Q9Y221 180 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 NUDCQ9Y266 331 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 USP16Q9Y5T5 823 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 MRVI1Q9Y6F6 885 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 SCN4AP35499 1836 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 COL3A1P02461 1466 aaPredicted RBP6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 RNF123Q5XPI4 1314 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 ZNF541Q9H0D2 1346 aa6.7□□□□□ -1.34
SMARCC2-207ENST00000549757 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 PRAMEF22A3QJZ6 481 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 KCNQ3O43525 872 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 ZNF500O60304 480 aaPredicted RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 GADD45BO75293 160 aaPredicted RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 ALDH1L1O75891 902 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 FOSP01100 380 aaPredicted RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 MYL1P05976 194 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 NEFMP07197 916 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 CTSBP07858 339 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 CTCFP49711 727 aaPredicted RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 ST13P50502 369 aaKnown RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 GSTM4Q03013 218 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 GRM1Q13255 1194 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 HLTFQ14527 1009 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 BRD3Q15059 726 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 UVSSAQ2YD98 709 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 MEI1Q5TIA1 1274 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 ZNF280DQ6N043 979 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 MCM10Q7L590 875 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 PNMA8AQ86V59 439 aaPredicted RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 PPM1EQ8WY54 764 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 CCDC113Q9H0I3 377 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 SCINQ9Y6U3 715 aa6.69□□□□□ -1.34
SMARCC2-207ENST00000549757 NRDCO43847 1150 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms