RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 RANBP17Q9H2T7 1088 aaKnown RBP21.52■■□□□ 1.04
BRF1-215ENST00000549655 PCDHA12Q9UN75 941 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 HOXA13P31271 388 aaPredicted RBP21.51■■□□□ 1.03
BRF1-215ENST00000549655 KRT79Q5XKE5 535 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 CCDC174Q6PII3 467 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 MOXD1Q6UVY6 613 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 SNX29Q8TEQ0 813 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 CDK5RAP3Q96JB5 506 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 MBOAT7Q96N66 472 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 PNMA5Q96PV4 448 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 C7orf25Q9BPX7 421 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 TRIM9Q9C026 710 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 FEM1BQ9UK73 627 aa21.51■■□□□ 1.03
BRF1-215ENST00000549655 AMPD3Q01432 767 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 SEMA3FQ13275 785 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 NUDT12Q9BQG2 462 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 INTS13Q9NVM9 706 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 STK17AQ9UEE5 414 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 RWDD2AQ9UIY3 292 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 PIK3CDO00329 1044 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 RHOBTB3O94955 611 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 SREBF1P36956 1147 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 PRCPP42785 496 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 PAK1Q13153 545 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
BRF1-215ENST00000549655 KCNMB3Q9NPA1 279 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 BLOC1S4Q9NUP1 217 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 FBXO28Q9NVF7 368 aa21.5■■□□□ 1.03
BRF1-215ENST00000549655 DHX8Q14562 1220 aaKnown RBP21.49■■□□□ 1.03
BRF1-215ENST00000549655 VSTM4Q8IW00 320 aa21.49■■□□□ 1.03
BRF1-215ENST00000549655 NELFBQ8WX92 580 aa21.49■■□□□ 1.03
BRF1-215ENST00000549655 MAPK8IP1Q9UQF2 711 aa21.49■■□□□ 1.03
BRF1-215ENST00000549655 H7C1D1 291 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 CTNND1O60716 968 aaKnown RBP21.48■■□□□ 1.03
BRF1-215ENST00000549655 COBLO75128 1261 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 CDKAL1Q5VV42 579 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 SV2BQ7L1I2 683 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 UIMC1Q96RL1 719 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 SKILP12757 684 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 ASIC1P78348 528 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 TPD52L1Q16890 204 aaPredicted RBP21.48■■□□□ 1.03
BRF1-215ENST00000549655 PRR16Q569H4 304 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 NBPF12Q5TAG4 269 aaPredicted RBP21.48■■□□□ 1.03
BRF1-215ENST00000549655 ARMCX5Q6P1M9 558 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 ADSSL1Q8N142 457 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 CCDC150Q8NCX0 1101 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 GINM1Q9NU53 330 aa21.48■■□□□ 1.03
BRF1-215ENST00000549655 CCZ1BP86790 482 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 CCZ1P86791 482 aaPredicted RBP21.47■■□□□ 1.03
BRF1-215ENST00000549655 MCM6Q14566 821 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 Q4G0T1 1027 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 TMEM119Q4V9L6 283 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 FCHSD1Q86WN1 690 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 TEX2Q8IWB9 1127 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 SLFN12Q8IYM2 578 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 GIMAP8Q8ND71 665 aaPredicted RBP21.47■■□□□ 1.03
BRF1-215ENST00000549655 LARP4BQ92615 738 aaKnown RBP21.47■■□□□ 1.03
BRF1-215ENST00000549655 CCDC47Q96A33 483 aaKnown RBP21.47■■□□□ 1.03
BRF1-215ENST00000549655 CFBP00751 764 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 PTPN21Q16825 1174 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 RAD54LQ92698 747 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 EXOC1Q9NV70 894 aa21.47■■□□□ 1.03
BRF1-215ENST00000549655 FAM86B1E9PN63 330 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 FAM86B2P0C5J1 330 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 SFPQP23246 707 aaKnown RBP eCLIP21.46■■□□□ 1.03
BRF1-215ENST00000549655 INPP5BP32019 993 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 CIITAP33076 1130 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 ECM1Q16610 540 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 ARHGAP27Q6ZUM4 889 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 ETNPPLQ8TBG4 499 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 TBC1D5Q92609 795 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 LPAR1Q92633 364 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 KIAA1683Q9H0B3 1180 aa21.46■■□□□ 1.03
BRF1-215ENST00000549655 MRPL11Q9Y3B7 192 aaKnown RBP21.46■■□□□ 1.03
BRF1-215ENST00000549655 GCOM1H8Y6P7 765 aaPredicted RBP21.45■■□□□ 1.02
BRF1-215ENST00000549655 POLR2MP0CAP2 368 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 PDE4DQ08499 809 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 STIM1Q13586 685 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 NR1I3Q14994 352 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 DNTTIP2Q5QJE6 756 aaKnown RBP21.45■■□□□ 1.02
BRF1-215ENST00000549655 ANGEL2Q5VTE6 544 aaKnown RBP21.45■■□□□ 1.02
BRF1-215ENST00000549655 APTXQ7Z2E3 356 aaKnown RBP21.45■■□□□ 1.02
BRF1-215ENST00000549655 KCNK18Q7Z418 384 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 LENG9Q96B70 501 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 A0A1B0GTH6 734 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 MYMKA6NI61 221 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 TBX3O15119 743 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 WDR46O15213 610 aaKnown RBP21.45■■□□□ 1.02
BRF1-215ENST00000549655 CYP3A4P08684 503 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 CCT6AP40227 531 aaKnown RBP21.45■■□□□ 1.02
BRF1-215ENST00000549655 DCAF15Q66K64 600 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 LDHDQ86WU2 507 aa21.45■■□□□ 1.02
BRF1-215ENST00000549655 HYIQ5T013 277 aa21.44■■□□□ 1.02
BRF1-215ENST00000549655 TRPM4Q8TD43 1214 aa21.44■■□□□ 1.02
BRF1-215ENST00000549655 GPRC5DQ9NZD1 345 aa21.44■■□□□ 1.02
BRF1-215ENST00000549655 ABCB11O95342 1321 aa21.44■■□□□ 1.02
BRF1-215ENST00000549655 KDM3AQ9Y4C1 1321 aa21.44■■□□□ 1.02
BRF1-215ENST00000549655 APOBEC3FQ8IUX4 373 aaKnown RBP21.43■■□□□ 1.02
BRF1-215ENST00000549655 CTAGE1Q96RT6 745 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 GTPBP4Q9BZE4 634 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms