RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GOPCQ9HD26 462 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 PNMA2Q9UL42 364 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 FZD9O00144 591 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 CACNB3P54284 484 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 CXCL9Q07325 125 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 TCP11X2Q5H9J9 407 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 JAKMIP3Q5VZ66 844 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 KCTD1Q719H9 257 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-206ENST00000549505 CALML4Q96GE6 196 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ANO3Q9BYT9 981 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 VCPKMTQ9H867 229 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 DDX25Q9UHL0 483 aaKnown RBP11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ZNF112Q9UJU3 913 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 RABGAP1Q9Y3P9 1069 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 PCDHA1Q9Y5I3 950 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ARHGAP6O43182 974 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 TDP2O95551 362 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 GH2P01242 217 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 CCNE1P24864 410 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 PTGER2P43116 358 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 TCP10Q12799 353 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 ISM2Q6H9L7 571 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 FBXO11Q86XK2 927 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 TRIM34Q9BYJ4 488 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 FEM1BQ9UK73 627 aa11.21□□□□□ -0.61
RAB5B-206ENST00000549505 RPTORQ8N122 1335 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 PP2D1A8MPX8 630 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.62
RAB5B-206ENST00000549505 CCDC96Q2M329 555 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 FIGNQ5HY92 759 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 OGFOD1Q8N543 542 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 NELFBQ8WX92 580 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.62
RAB5B-206ENST00000549505 DUSP9Q99956 384 aaKnown RBP11.21□□□□□ -0.62
RAB5B-206ENST00000549505 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 LRWD1Q9UFC0 647 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 PRR12Q9ULL5 1215 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 LOXHD1Q8IVV2 1947 aa11.21□□□□□ -0.62
RAB5B-206ENST00000549505 BICDL2A1A5D9 508 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 TMEM232C9JQI7 657 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 NFKBIEO00221 500 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 MAPK8IP2Q13387 824 aaPredicted RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 SHROOM1Q2M3G4 852 aaPredicted RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 ZNF662Q6ZS27 426 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 GUF1Q8N442 669 aaKnown RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 PRDM10Q9NQV6 1147 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 ZNF277Q9NRM2 450 aaPredicted RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 NRDCO43847 1150 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 TECP42680 631 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 B3GNT9Q6UX72 402 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 NIPA1Q7RTP0 329 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 CHURC1Q8WUH1 139 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 SLC16A2P36021 539 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 MARSP56192 900 aaKnown RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 KRT31Q15323 416 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 SV2BQ7L1I2 683 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 LARP4BQ92615 738 aaKnown RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 LPAR1Q92633 364 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 CCDC47Q96A33 483 aaKnown RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 DNAJC19Q96DA6 116 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
RAB5B-206ENST00000549505 BLZF1Q9H2G9 400 aa11.2□□□□□ -0.62
RAB5B-206ENST00000549505 IGLV3-22A0A075B6J6 115 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 WNT10BO00744 389 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 FDX1P10109 184 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 CASP1P29466 404 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 HSD17B4P51659 736 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 STAT2P52630 851 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-206ENST00000549505 STIM1Q13586 685 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 TMEM174Q8WUU8 243 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 TAOK3Q9H2K8 898 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 L2HGDHQ9H9P8 463 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 MYOZ2Q9NPC6 264 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 VAV3Q9UKW4 847 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 RLFQ13129 1914 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 BAZ2BQ9UIF8 2168 aaKnown RBP11.19□□□□□ -0.62
RAB5B-206ENST00000549505 LGALS16A8MUM7 142 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 PSMA7O14818 248 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 TNNI2P48788 182 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 COPB1P53618 953 aaKnown RBP11.19□□□□□ -0.62
RAB5B-206ENST00000549505 ARHGAP4P98171 946 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 UBE2SQ16763 222 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 ZCWPW2Q504Y3 356 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 FILIP1Q7Z7B0 1213 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 DEFB132Q7Z7B7 95 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 REXO1L1PQ8IX06 675 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms