RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KRT31Q15323 416 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 SPATA1Q5VX52 437 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 EHD2Q9NZN4 543 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
LINC00661-204ENST00000549354 MYH8P13535 1937 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 HSP90B2PQ58FF3 399 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 BEND6Q5SZJ8 279 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-204ENST00000549354 KIAA1328Q86T90 577 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 ATRNL1Q5VV63 1379 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 C21orf2O43822 256 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
LINC00661-204ENST00000549354 UBA7P41226 1012 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
LINC00661-204ENST00000549354 NFIAQ12857 509 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 LRRC41Q15345 812 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 LEKR1Q6ZMV7 388 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 GMLQ99445 158 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 FAM207AQ9NSI2 230 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC194A0A1B0GVG4 234 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 MYO1CO00159 1063 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 AKR1B1P15121 316 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 KIAA0825Q8IV33 1275 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 NOC3LQ8WTT2 800 aaKnown RBP12.39□□□□□ -0.43
LINC00661-204ENST00000549354 CRACR2AQ9BSW2 395 aa12.39□□□□□ -0.43
LINC00661-204ENST00000549354 B4DLN1 442 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 DPEP1P16444 411 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 TGFB2P61812 414 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 APTXQ7Z2E3 356 aaKnown RBP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 BARHL2Q9NY43 387 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 COL4A5P29400 1685 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 KLRF2D3W0D1 207 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 ENTPD3O75355 529 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 CASP8Q14790 479 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 HDXQ7Z353 690 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 NAPGQ99747 312 aaPredicted RBP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 CENPHQ9H3R5 247 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00661-204ENST00000549354 PCDHA4Q9UN74 947 aa12.38□□□□□ -0.43
LINC00661-204ENST00000549354 LRRIQ3A6PVS8 624 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-204ENST00000549354 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 STXBP3O00186 592 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 MYO1BO43795 1136 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 SOGA3Q5TF21 947 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 SH3BP5LQ7L8J4 393 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-204ENST00000549354 TECP42680 631 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 TXKP42681 527 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 PRCPP42785 496 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 SLC7A5Q01650 507 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC122Q5T0U0 273 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-204ENST00000549354 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 TTLL1O95922 423 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 PDHBP11177 359 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 FCER1AP12319 257 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
LINC00661-204ENST00000549354 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 CEP112Q8N8E3 955 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 MKL1Q969V6 931 aa12.37□□□□□ -0.43
LINC00661-204ENST00000549354 BRCA1P38398 1863 aaKnown RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 hCG_1984214I3L0E3 225 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ERLIN1O75477 346 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 PLEKP08567 350 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ASIC1P78348 528 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 APBA1Q02410 837 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ZNF713Q8N859 430 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ZMYND12Q9H0C1 365 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 MMRN2Q9H8L6 949 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 FAM204AQ9H8W3 233 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms