RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 GRIN2DO15399 1336 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 NKRFO15226 690 aaKnown RBP eCLIP17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 TLR3O15455 904 aaKnown RBP17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 TIMP1P01033 207 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 TXNP10599 105 aaKnown RBP17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 MCM5P33992 734 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 CPT1AP50416 773 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 HSD17B4P51659 736 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 EPHB4P54760 987 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 PSMC6P62333 389 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 GHRHRQ02643 423 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 FPGSQ05932 587 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 ITGA7Q13683 1181 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 COL9A3Q14050 684 aaPredicted RBP17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 NECTIN1Q15223 517 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 IWS1Q96ST2 819 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 MTA3Q9BTC8 594 aa17.63■□□□□ 0.41
ARFGAP1-221ENST00000549047 SH2B2O14492 632 aaPredicted RBP17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 DDAH1O94760 285 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 ARIH2O95376 493 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 CD4P01730 458 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 TRAF1Q13077 416 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 TTLL4Q14679 1199 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 STXBP2Q15833 593 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 DEFB123Q8N688 67 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 COPS5Q92905 334 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 MYL10Q9BUA6 226 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 SEZ6LQ9BYH1 1024 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 PXMP2Q9NR77 195 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
ARFGAP1-221ENST00000549047 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 MYL3P08590 195 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 BRDTQ58F21 947 aaPredicted RBP17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 CCDC62Q6P9F0 684 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 SEPT14Q6ZU15 432 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 Q7L0L9 218 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 TMEM87BQ96K49 555 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 MAP3K14Q99558 947 aa17.61■□□□□ 0.41
ARFGAP1-221ENST00000549047 A6NJR5 290 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 CDC45O75419 566 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 NR3C2P08235 984 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 HOXA13P31271 388 aaPredicted RBP17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 KIF5BP33176 963 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 MFSD5Q6N075 450 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 PIBF1Q8WXW3 757 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 MTG1Q9BT17 334 aaPredicted RBP17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 PPP1R12CQ9BZL4 782 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 TRPV6Q9H1D0 765 aa17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
ARFGAP1-221ENST00000549047 CCDC69A6NI79 296 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 LIFRP42702 1097 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 RNF20Q5VTR2 975 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 PDCD2LQ9BRP1 358 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 SPZ1Q9BXG8 430 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 LRRC2Q9BYS8 371 aa17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 ALDH8A1Q9H2A2 487 aaPredicted RBP17.59■□□□□ 0.41
ARFGAP1-221ENST00000549047 B4GALT4O60513 344 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 KPNA6O60684 536 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 GH1P01241 217 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 CYP2C18P33260 490 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 TMEM199Q8N511 208 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 LZTS2Q9BRK4 669 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 HIPK3Q9H422 1215 aa17.58■□□□□ 0.4
ARFGAP1-221ENST00000549047 COL6A3P12111 3177 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 PLEKHA8P1O95397 391 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 MYCLP12524 364 aaPredicted RBP17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 CSF2RAP15509 400 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 RXRAP19793 462 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 SMARCA1P28370 1054 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 GNAQP50148 359 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 ARHGAP1Q07960 439 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.41e-12■■□□□ 12.7
ARFGAP1-221ENST00000549047 FCHSD1Q86WN1 690 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 IL31RAQ8NI17 732 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 AFG1LQ8WV93 481 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 RRP36Q96EU6 259 aaKnown RBP17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 DDX41Q9UJV9 622 aaKnown RBP17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 SLC12A7Q9Y666 1083 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 MRVI1Q9Y6F6 885 aa17.57■□□□□ 0.4
ARFGAP1-221ENST00000549047 UMODL1Q5DID0 1318 aa17.56■□□□□ 0.4
ARFGAP1-221ENST00000549047 CALM1P0DP23 149 aa17.56■□□□□ 0.4
ARFGAP1-221ENST00000549047 CALM2P0DP24 149 aa17.56■□□□□ 0.4
ARFGAP1-221ENST00000549047 CALM3P0DP25 149 aa17.56■□□□□ 0.4
ARFGAP1-221ENST00000549047 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
ARFGAP1-221ENST00000549047 PGM5Q15124 567 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms