RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 TET1Q8NFU7 2136 aa15.08■□□□□ 0
PTCH1-218ENST00000548945 PITPNM1O00562 1244 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 MYL3P08590 195 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 ADGRE1Q14246 886 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 TBC1D10CQ8IV04 446 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 SMC5Q8IY18 1101 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 SCLYQ96I15 445 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 PRDM6Q9NQX0 595 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 YBX2Q9Y2T7 364 aaKnown RBP15.07■□□□□ 0
PTCH1-218ENST00000548945 XIRP2A4UGR9 3374 aa15.07■□□□□ 0
PTCH1-218ENST00000548945 PRRC2BQ5JSZ5 2229 aaKnown RBP15.07■□□□□ 0
PTCH1-218ENST00000548945 ZNF213O14771 459 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
PTCH1-218ENST00000548945 CYP2C9P11712 490 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 ATP2A2P16615 1042 aaKnown RBP15.06■□□□□ 0
PTCH1-218ENST00000548945 SDSP20132 328 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 TTLL4Q14679 1199 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 NBPF20Q3BBV1 942 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 IQCA1Q86XH1 822 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 ANKS1AQ92625 1134 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 RILPL2Q969X0 211 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 LNPKQ9C0E8 428 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 THEGQ9P2T0 379 aa15.06■□□□□ 0
PTCH1-218ENST00000548945 TXNP10599 105 aaKnown RBP15.05■□□□□ -0
PTCH1-218ENST00000548945 ACTN1P12814 892 aa15.05■□□□□ -0
PTCH1-218ENST00000548945 PPP2R2DQ66LE6 453 aa15.05■□□□□ -0
PTCH1-218ENST00000548945 PNMA1Q8ND90 353 aa15.05■□□□□ -0
PTCH1-218ENST00000548945 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
PTCH1-218ENST00000548945 ABCB11O95342 1321 aa15.05■□□□□ -0
PTCH1-218ENST00000548945 NEDD4P46934 1319 aa15.05■□□□□ -0
PTCH1-218ENST00000548945 MYH7BA7E2Y1 1941 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 ZBBXA8MT70 800 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 TNFRSF10AO00220 468 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 HIP1O00291 1037 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 IGFBP4P22692 258 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 BFSP2Q13515 415 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 USH1GQ495M9 461 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 ASPRV1Q53RT3 343 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 FAM47CQ5HY64 1035 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 CCDC62Q6P9F0 684 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 MCF2L2Q86YR7 1114 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 RETREG2Q8NC44 543 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 PHOSPHO2Q8TCD6 241 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 NSUN6Q8TEA1 469 aaKnown RBP15.04■□□□□ -0
PTCH1-218ENST00000548945 ASB2Q96Q27 587 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 IWS1Q96ST2 819 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 SLC9A7Q96T83 725 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 KAT14Q9H8E8 782 aa15.04■□□□□ -0
PTCH1-218ENST00000548945 KDM4AO75164 1064 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 IQCF3P0C7M6 154 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 GOLGA8HP0CJ92 632 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 RABGGTBP53611 331 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 MRPS5P82675 430 aaKnown RBP15.03■□□□□ -0
PTCH1-218ENST00000548945 CDC37Q16543 378 aaPredicted RBP15.03■□□□□ -0
PTCH1-218ENST00000548945 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 DEFB128Q7Z7B8 93 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 SESTD1Q86VW0 696 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 PLEKHM2Q8IWE5 1019 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 ADGRF4Q8IZF3 695 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 PPM1EQ8WY54 764 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 COPS5Q92905 334 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 ZSCAN10Q96SZ4 725 aaPredicted RBP15.03■□□□□ -0
PTCH1-218ENST00000548945 ZKSCAN3Q9BRR0 538 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 DSCC1Q9BVC3 393 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 UBA5Q9GZZ9 404 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
PTCH1-218ENST00000548945 DIAPH3Q9NSV4 1193 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 BRWD1Q9NSI6 2320 aa15.03■□□□□ -0
PTCH1-218ENST00000548945 ARIH2O95376 493 aa15.02■□□□□ -0
PTCH1-218ENST00000548945 GH1P01241 217 aa15.02■□□□□ -0
PTCH1-218ENST00000548945 POU3F3P20264 500 aaPredicted RBP15.02■□□□□ -0
PTCH1-218ENST00000548945 NUCB1Q02818 461 aa15.02■□□□□ -0
PTCH1-218ENST00000548945 CHD1LQ86WJ1 897 aa15.02■□□□□ -0
PTCH1-218ENST00000548945 ENAHQ8N8S7 591 aaPredicted RBP15.02■□□□□ -0
PTCH1-218ENST00000548945 CAGE1Q8TC20 777 aa15.02■□□□□ -0
PTCH1-218ENST00000548945 SYTL5Q8TDW5 730 aaPredicted RBP15.02■□□□□ -0
PTCH1-218ENST00000548945 NOD1Q9Y239 953 aa15.02■□□□□ -0
PTCH1-218ENST00000548945 MRPL11Q9Y3B7 192 aaKnown RBP15.02■□□□□ -0
PTCH1-218ENST00000548945 BAIAP3O94812 1187 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 PARNO95453 639 aaKnown RBP15.01□□□□□ -0.01
PTCH1-218ENST00000548945 MMP3P08254 477 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 MYOGP15173 224 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 ARHGAP1Q07960 439 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 STXBP2Q15833 593 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 CCDC85BQ15834 202 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-218ENST00000548945 IMMTQ16891 758 aaKnown RBP15.01□□□□□ -0.01
PTCH1-218ENST00000548945 CWC27Q6UX04 472 aaKnown RBP15.01□□□□□ -0.01
PTCH1-218ENST00000548945 AFAP1L1Q8TED9 768 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 EMID1Q96A84 441 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-218ENST00000548945 RMDN3Q96TC7 470 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 KRT23Q9C075 422 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 CPVLQ9H3G5 476 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 CNNM2Q9H8M5 875 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 ZSWIM5Q9P217 1185 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 CTNNA3Q9UI47 895 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 PTPRSQ13332 1948 aa15.01□□□□□ -0.01
PTCH1-218ENST00000548945 B4E1Z4 1266 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 EIF3JO75822 258 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms