RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 GOLGA6CA6NDK9 693 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 LRRC53A6NM62 1247 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 AKR1B10O60218 316 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 USO1O60763 962 aaKnown RBP15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 TACC1O75410 805 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 GOLGA6DP0CG33 693 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 NONOQ15233 471 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 TTC19Q6DKK2 380 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 GLIS3Q8NEA6 775 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 AK8Q96MA6 479 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 OSBPL9Q96SU4 736 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 TSGA10Q9BZW7 698 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 ZMYND12Q9H0C1 365 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 CUEDC2Q9H467 287 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 GOLGA6AQ9NYA3 693 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 FAM184BQ9ULE4 1060 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 CCDC88AQ3V6T2 1871 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 CDK17Q00537 523 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 IQCEQ6IPM2 695 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 MAPKAPK5Q8IW41 473 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 FNBP4Q8N3X1 1017 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 FAM76AQ8TAV0 307 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 TBCKQ8TEA7 893 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 ANKS1AQ92625 1134 aa15.71■□□□□ 0.11
RAPGEF3-218ENST00000548919 MYMKA6NI61 221 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 DNAJC21Q5F1R6 531 aaKnown RBP15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 GALNT17Q6IS24 598 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 CLEC4GQ6UXB4 293 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 NEK8Q86SG6 692 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 LINC00116Q8NCU8 138 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 BUB1O43683 1085 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 DNA2P51530 1060 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 GFPT1Q06210 699 aaPredicted RBP15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 LRRC41Q15345 812 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 TMED8Q6PL24 325 aaPredicted RBP15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 TMC4Q7Z404 712 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 MMGT1Q8N4V1 131 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 MS4A14Q96JA4 679 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 MAGEF1Q9HAY2 307 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 RASA1P20936 1047 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 GRB10Q13322 594 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 CCDC70Q6NSX1 233 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 TSEN2Q8NCE0 465 aaKnown RBP15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
RAPGEF3-218ENST00000548919 LDHBP07195 334 aaKnown RBP15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 HNRNPH3P31942 346 aaKnown RBP15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 MAGEA9P43362 315 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 CORO7P57737 925 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 AMPD3Q01432 767 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 RASSF7Q02833 373 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 KRT25Q7Z3Z0 450 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 CALML4Q96GE6 196 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 GPR101Q96P66 508 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 UBA5Q9GZZ9 404 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 COL14A1Q05707 1796 aaKnown RBP15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 ZPR1O75312 459 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 MAGEA1P43355 309 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 CCDC181Q5TID7 509 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 MTMR8Q96EF0 704 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 PIGSQ96S52 555 aa15.69■□□□□ 0.1
RAPGEF3-218ENST00000548919 POTEMA6NI47 508 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 SLC1A4P43007 532 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 CCT5P48643 541 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 IRAK1P51617 712 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 HAUS3Q68CZ6 603 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 PNMA5Q96PV4 448 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 NUDT12Q9BQG2 462 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 C6orf50Q9HD87 102 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 RBM12Q9NTZ6 932 aaKnown RBP15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 SHOX2O60902 331 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 BAP1Q92560 729 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 TANGO6Q9C0B7 1094 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 NLRC4Q9NPP4 1024 aa15.68■□□□□ 0.1
RAPGEF3-218ENST00000548919 SLC37A4O43826 429 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 APBA1Q02410 837 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 MAN2A1Q16706 1144 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 NBPF5PQ86XG9 351 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 GJA10Q969M2 543 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 ARL8AQ96BM9 186 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 ALS2CR12Q96Q35 445 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 TLR10Q9BXR5 811 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 HYOU1Q9Y4L1 999 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 UIMC1Q96RL1 719 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 STIM2Q9P246 746 aa15.67■□□□□ 0.1
RAPGEF3-218ENST00000548919 ZSCAN5CA6NGD5 496 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms