RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 MYH8P13535 1937 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 SH2B2O14492 632 aaPredicted RBP23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 ADCY6O43306 1168 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 LIFRP42702 1097 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 NT5C2P49902 561 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 PPARAQ07869 468 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 CYB5R4Q7L1T6 521 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 CHST3Q7LGC8 479 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 ZNF467Q7Z7K2 595 aaPredicted RBP23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 SGMS1Q86VZ5 419 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 CLEC10AQ8IUN9 316 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 RPUSD2Q8IZ73 545 aaKnown RBP23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 SLC43A3Q8NBI5 491 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 REPS2Q8NFH8 660 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 DDX11Q96FC9 970 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 PPP1R9AQ9ULJ8 1098 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 NEDD4P46934 1319 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 UMODL1Q5DID0 1318 aa23.06■■□□□ 1.28
CTDSP2-204ENST00000548823 DNAJC25-GNG10A0A024R161 153 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 FAM86C2PA6NEL3 165 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 PI4K2BG5E9Z4 385 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 CCDC144BQ3MJ40 725 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 HLA-CQ95604 372 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 ABHD16BQ9H3Z7 469 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 MYH15Q9Y2K3 1946 aa23.05■■□□□ 1.28
CTDSP2-204ENST00000548823 B4E1Z4 1266 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 RFXAPO00287 272 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 FGRP09769 529 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 ATP2A2P16615 1042 aaKnown RBP23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 CCL23P55773 120 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 NKX3-2P78367 333 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 SBK1Q52WX2 424 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 FOXD4L5Q5VV16 416 aaPredicted RBP23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 IGDCC4Q8TDY8 1250 aa23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 FOXD4L4Q8WXT5 416 aaPredicted RBP23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.04■■□□□ 1.28
CTDSP2-204ENST00000548823 KLF18A0A0U1RQI7 1052 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 CTAGE5O15320 804 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 CTDNEP1O95476 244 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 AKR1B1P15121 316 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 CTDSPL2Q05D32 466 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 TMEM67Q5HYA8 995 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 NOC4LQ9BVI4 516 aaKnown RBP23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 BRPF3Q9ULD4 1205 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 DDX49Q9Y6V7 483 aaKnown RBP23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 NID2Q14112 1375 aa23.03■■□□□ 1.28
CTDSP2-204ENST00000548823 ZBBXA8MT70 800 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 SMIM22K7EJ46 135 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 PRPF40AO75400 957 aaKnown RBP23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 MBD3O95983 291 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 TMTC2Q8N394 836 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 SDR42E1Q8WUS8 393 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 CCDC17Q96LX7 622 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 TEX13BQ9BXU2 312 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 SEZ6LQ9BYH1 1024 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 ZSWIM5Q9P217 1185 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 ISY1Q9ULR0 285 aaKnown RBP23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 MCM3APO60318 1980 aa23.02■■□□□ 1.28
CTDSP2-204ENST00000548823 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 JAK2O60674 1132 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 CABYRO75952 493 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 CA3P07451 260 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 RCAN1P53805 252 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 CSPP1Q1MSJ5 1256 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 FAM184AQ8NB25 1140 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 WNT8AQ9H1J5 351 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 DCP1AQ9NPI6 582 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 GPHNQ9NQX3 736 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 VPS37CA5D8V6 355 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 SART3Q15020 963 aaKnown RBP23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 DYNLL2Q96FJ2 89 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 LY9Q9HBG7 655 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 GOPCQ9HD26 462 aa23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 ARPP21Q9UBL0 812 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-204ENST00000548823 GOLGA8BA8MQT2 603 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 PRR33A8MZF0 331 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 KDM4AO75164 1064 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 CYP2D6P10635 497 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 EEF2P13639 858 aaKnown RBP23■■□□□ 1.27
CTDSP2-204ENST00000548823 MRE11P49959 708 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 CCT2P78371 535 aaKnown RBP23■■□□□ 1.27
CTDSP2-204ENST00000548823 BEX3Q00994 111 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 ITGA7Q13683 1181 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 KRT40Q6A162 431 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 SNRNP48Q6IEG0 339 aaKnown RBP23■■□□□ 1.27
CTDSP2-204ENST00000548823 CTR9Q6PD62 1173 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 ESR2Q92731 530 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 VWCEQ96DN2 955 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 SNX27Q96L92 541 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 ZSCAN16Q9H4T2 348 aaPredicted RBP23■■□□□ 1.27
CTDSP2-204ENST00000548823 CERS4Q9HA82 394 aa23■■□□□ 1.27
CTDSP2-204ENST00000548823 EPOPA6NHQ4 379 aa22.99■■□□□ 1.27
CTDSP2-204ENST00000548823 FAM83BQ5T0W9 1011 aa22.99■■□□□ 1.27
CTDSP2-204ENST00000548823 APOA5Q6Q788 366 aa22.99■■□□□ 1.27
CTDSP2-204ENST00000548823 CXCL17Q6UXB2 119 aa22.99■■□□□ 1.27
CTDSP2-204ENST00000548823 KANSL2Q9H9L4 492 aa22.99■■□□□ 1.27
CTDSP2-204ENST00000548823 RIPK3Q9Y572 518 aa22.99■■□□□ 1.27
CTDSP2-204ENST00000548823 IFIT3O14879 490 aaKnown RBP22.98■■□□□ 1.27
CTDSP2-204ENST00000548823 ORC4O43929 436 aa22.98■■□□□ 1.27
CTDSP2-204ENST00000548823 PFKMP08237 780 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms