RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 IKQ13123 557 aaPredicted RBP10.06□□□□□ -0.8
TROAP-208ENST00000548817 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 FAM133AQ8N9E0 248 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 FBXO22Q8NEZ5 403 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
TROAP-208ENST00000548817 MTUS1Q9ULD2 1270 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 PLXNA3P51805 1871 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 ZNF292O60281 2723 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 MYH4Q9Y623 1939 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 ABHD14A-ACY1A0A1B0GW23 586 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 PATL2C9JE40 543 aaKnown RBP10.05□□□□□ -0.8
TROAP-208ENST00000548817 GPAA1O43292 621 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 PRDM1O75626 825 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
TROAP-208ENST00000548817 TSPY3P0CV98 308 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 TSPY8P0CW00 308 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 SMPD1P17405 629 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 ID4P47928 161 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 CNKSR3Q6P9H4 555 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 AFAP1L1Q8TED9 768 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 CHURC1Q8WUH1 139 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
TROAP-208ENST00000548817 MKL1Q969V6 931 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 CRBNQ96SW2 442 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.05□□□□□ -0.8
TROAP-208ENST00000548817 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
TROAP-208ENST00000548817 RAVER2Q9HCJ3 691 aaKnown RBP10.05□□□□□ -0.8
TROAP-208ENST00000548817 ALG13Q9NP73 1137 aaKnown RBP10.05□□□□□ -0.8
TROAP-208ENST00000548817 SYNPO2Q9UMS6 1093 aa10.05□□□□□ -0.8
TROAP-208ENST00000548817 MYO15AQ9UKN7 3530 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 COL4A6Q14031 1691 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 KPNA6O60684 536 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 RGS20O76081 388 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 BMP3P12645 472 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 CPT1AP50416 773 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
TROAP-208ENST00000548817 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 OSBP2Q969R2 916 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 CEP95Q96GE4 821 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
TROAP-208ENST00000548817 NAPBQ9H115 298 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 SLC38A10Q9HBR0 1119 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 VTA1Q9NP79 307 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 FAM86C1Q9NVL1 165 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 MTMR4Q9NYA4 1195 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 INSL6Q9Y581 213 aa10.04□□□□□ -0.8
TROAP-208ENST00000548817 WDR87Q6ZQQ6 2873 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 PRR23AA6NEV1 266 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 TMEM232C9JQI7 657 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 CXCL10P02778 98 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 SLC1A4P43007 532 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 DEFB103AP81534 67 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 TFAP4Q01664 338 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 SMAD4Q13485 552 aaKnown RBP10.03□□□□□ -0.8
TROAP-208ENST00000548817 CTC1Q2NKJ3 1217 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 TKFCQ3LXA3 575 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 DUSP28Q4G0W2 176 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 BRDTQ58F21 947 aaPredicted RBP10.03□□□□□ -0.8
TROAP-208ENST00000548817 FAM47CQ5HY64 1035 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 FAM160B2Q86V87 743 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 IFNL3Q8IZI9 196 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 LRRC47Q8N1G4 583 aaKnown RBP10.03□□□□□ -0.8
TROAP-208ENST00000548817 GMCL1P1Q8NEA9 526 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 SP7Q8TDD2 431 aaPredicted RBP10.03□□□□□ -0.8
TROAP-208ENST00000548817 FSD1Q9BTV5 496 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 DCTPP1Q9H773 170 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 ACAD9Q9H845 621 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
TROAP-208ENST00000548817 HOMER2Q9NSB8 354 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 NOD1Q9Y239 953 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 NCOR2Q9Y618 2525 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
TROAP-208ENST00000548817 TPRP12270 2363 aaKnown RBP10.02□□□□□ -0.8
TROAP-208ENST00000548817 LOC102724159A0A0B4J2E5 919 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 IGKV6D-41A0A0C4DH26 115 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 H3BNC9 293 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 M0R2C6 588 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 MBTPS2O43462 519 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 NBL1P41271 181 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 STAT2P52630 851 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 ZXDAP98168 799 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 CNTN2Q02246 1040 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 RBL2Q08999 1139 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 SIGLEC14Q08ET2 396 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 PWP2Q15269 919 aaKnown RBP10.02□□□□□ -0.81
TROAP-208ENST00000548817 TCEAL5Q5H9L2 206 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 TAPT1Q6NXT6 567 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 STAG1Q8WVM7 1258 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 C17orf80Q9BSJ5 609 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 CLDND1Q9NY35 253 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms