RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TAF1P21675 1872 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 RGL2O15211 777 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 CCNT1O60563 726 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 CLSTN1O94985 981 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 MOCS3O95396 460 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 KLRK1P26718 216 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 GNA11P29992 359 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 IRAK1P51617 712 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 LETM2Q2VYF4 491 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 GLE1Q53GS7 698 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 FOXR2Q6PJQ5 311 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 NEK8Q86SG6 692 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 MLXIPQ9HAP2 919 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 MKNK2Q9HBH9 465 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 C6orf50Q9HD87 102 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 RNF14Q9UBS8 474 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 DMGDHQ9UI17 866 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 A0A087WUV0 522 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 AKR1B10O60218 316 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 TSPY3P0CV98 308 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 TSPY8P0CW00 308 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 PAFAH1B1P43034 410 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 HSPA2P54652 639 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 RPS8P62241 208 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 LRRC63Q05C16 580 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 NNTQ13423 1086 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 CCDC181Q5TID7 509 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 UNC13DQ70J99 1090 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 SV2BQ7L1I2 683 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 DZIP1Q86YF9 867 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 ZNF444Q8N0Y2 327 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 GUF1Q8N442 669 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 RNF10Q8N5U6 811 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 HDAC7Q8WUI4 952 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 MMTAG2Q9BU76 263 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 CAPS2Q9BXY5 557 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 STIM2Q9P246 746 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 STK17AQ9UEE5 414 aa10.96□□□□□ -0.65
SMARCD1-205ENST00000548573 SSU72P8A0A1W2PR75 194 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 USP17L3A6NCW0 530 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 USP17L4A6NCW7 530 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 NKRFO15226 690 aaKnown RBP eCLIP10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 SMARCA1P28370 1054 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 TECP42680 631 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 MAGEA1P43355 309 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 NAPAP54920 295 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 EZH2Q15910 746 aaKnown RBP10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 ASTE1Q2TB18 679 aaPredicted RBP10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 USP17L1Q7RTZ2 530 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 DYNLL2Q96FJ2 89 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 PLEKHA4Q9H4M7 779 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 FAM207AQ9NSI2 230 aaPredicted RBP10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 TFCP2L1Q9NZI6 479 aa10.96□□□□□ -0.66
SMARCD1-205ENST00000548573 SMCO2A6NFE2 343 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 LRRC53A6NM62 1247 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 KLRF2D3W0D1 207 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 RBAK-RBAKDNI3L0D1 243 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 EPHB6O15197 1021 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 EIF3HO15372 352 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 SKOR1P84550 965 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 HAUS3Q68CZ6 603 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 NFRKBQ6P4R8 1299 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 BAP1Q92560 729 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 RRP36Q96EU6 259 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 MMRN2Q9H8L6 949 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 SLC39A2Q9NP94 309 aa10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
SMARCD1-205ENST00000548573 ESYT2A0FGR8 921 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 EBAG9O00559 213 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 HSF2BPO75031 334 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 PSMD2Q13200 908 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 GRB10Q13322 594 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 C8orf74Q6P047 294 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 PDXDC1Q6P996 788 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 RRAGAQ7L523 313 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 TADA2BQ86TJ2 420 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 NOX5Q96PH1 765 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 MTMR9Q96QG7 549 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 LRRC27Q9C0I9 530 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 ZNF287Q9HBT7 754 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 RIC8AQ9NPQ8 531 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 BLOC1S4Q9NUP1 217 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 GRIN2DO15399 1336 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 SHTN1A0MZ66 631 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 MYMKA6NI61 221 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 PPP4CP60510 307 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 APBA1Q02410 837 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 DDB1Q16531 1140 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 SLC4A8Q2Y0W8 1093 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms