RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	CARF	Q8N187	725 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	C19orf47	Q8N9M1	422 aa	Known RBP	6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	RASGRP4	Q8TDF6	673 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	USP33	Q8TEY7	942 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	RCC1L	Q96I51	464 aa	Known RBP	6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	USP40	Q9NVE5	1235 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	CLEC1B	Q9P126	229 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	CUX2	O14529	1486 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	NOBOX	O60393	691 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	KCNH1	O95259	989 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	SMAD4	Q13485	552 aa	Known RBP	6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	WWC2	Q6AWC2	1192 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	NETO2	Q8NC67	525 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	DPF3	Q92784	378 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	ZBTB8A	Q96BR9	441 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	PEX11G	Q96HA9	241 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	AKT3	Q9Y243	479 aa		6.3	□□□□□ -1.4
RPAP3-205	ENST00000548211	PLS3	P13797	630 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	HDLBP	Q00341	1268 aa	Known RBP	6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	CACNB2	Q08289	660 aa	Predicted RBP	6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	SCRN1	Q12765	414 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	GRB10	Q13322	594 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	HHIPL2	Q6UWX4	724 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	NT5DC4	Q86YG4	428 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	FAM26E	Q8N5C1	309 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	PLEKHO2	Q8TD55	490 aa		6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.29	□□□□□ -1.4
RPAP3-205	ENST00000548211	C8B	P07358	591 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	CNR2	P34972	360 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	TRIM26	Q12899	539 aa	Predicted RBP	6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	INF2	Q27J81	1249 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	SPATS1	Q496A3	300 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	VHLL	Q6RSH7	139 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	STK32C	Q86UX6	486 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	OR6P1	Q8NGX9	317 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	CPA5	Q8WXQ8	436 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	COPS5	Q92905	334 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	MARCH2	Q9P0N8	246 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	NUDT5	Q9UKK9	219 aa		6.28	□□□□□ -1.4
RPAP3-205	ENST00000548211	ANKRD34B	A5PLL1	514 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	NPHS1	O60500	1241 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	INSRR	P14616	1297 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	VAMP1	P23763	118 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	GJA8	P48165	433 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	SARS	P49591	514 aa	Known RBP	6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	CYP4F3	Q08477	520 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	SLC9A5	Q14940	896 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	ZNF761	Q86XN6	746 aa	Predicted RBP	6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	TEX2	Q8IWB9	1127 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	SPATA32	Q96LK8	384 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	GORASP1	Q9BQQ3	440 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	LNPK	Q9C0E8	428 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	BTG4	Q9NY30	223 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211	EMC9	Q9Y3B6	208 aa		6.27	□□□□□ -1.41
RPAP3-205	ENST00000548211		K7ESM1	405 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	ARNTL	O00327	626 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	SGSM2	O43147	1006 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	ZBTB7A	O95365	584 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	THBD	P07204	575 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	CASP7	P55210	303 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	CPLX3	Q8WVH0	158 aa		6.26	□□□□□ -1.41
RPAP3-205	ENST00000548211	GJA9	P57773	515 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	ZXDC	Q2QGD7	858 aa	Predicted RBP	6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	GTF2IRD2B	Q6EKJ0	949 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	GTF2IRD2	Q86UP8	949 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	LINC00482	Q8N8I6	264 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	BVES	Q8NE79	360 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	MMP19	Q99542	508 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	ACBD3	Q9H3P7	528 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	NTM	Q9P121	344 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	DCAF1	Q9Y4B6	1507 aa		6.25	□□□□□ -1.41
RPAP3-205	ENST00000548211	TRBV23OR9-2	A0A075B6M9	112 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	TBX1	O43435	398 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	FPR2	P25090	351 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	ADAMTS17	Q8TE56	1095 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	FRS2	Q8WU20	508 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	PPP1R14A	Q96A00	147 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	ANAPC16	Q96DE5	110 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	APBA2	Q99767	749 aa		6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	TMEFF2	Q9UIK5	374 aa	Predicted RBP	6.24	□□□□□ -1.41
RPAP3-205	ENST00000548211	ZBTB7C	A1YPR0	619 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	C22orf46	C9J442	243 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	CYP2C8	P10632	490 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	PUM1	Q14671	1186 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	CD300LD	Q6UXZ3	194 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	TTLL7	Q6ZT98	887 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	MRGPRX3	Q96LB0	322 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	SCRIB	Q14160	1630 aa		6.23	□□□□□ -1.41
RPAP3-205	ENST00000548211	SMARCA5	O60264	1052 aa	Predicted RBP	6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	ITGB3	P05106	788 aa		6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	THBS2	P35442	1172 aa		6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	ETV3L	Q6ZN32	361 aa		6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	DCP2	Q8IU60	420 aa	Known RBP	6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	CCDC103	Q8IW40	242 aa		6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	TRIM59	Q8IWR1	403 aa		6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	NPLOC4	Q8TAT6	608 aa		6.22	□□□□□ -1.41
RPAP3-205	ENST00000548211	MRRF	Q96E11	262 aa	Known RBP	6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms