RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 ASNSP08243 561 aa13.23□□□□□ -0.29
RNF41-203ENST00000547967 ARHGAP4P98171 946 aa13.23□□□□□ -0.29
RNF41-203ENST00000547967 DGKZQ13574 1117 aa13.23□□□□□ -0.29
RNF41-203ENST00000547967 PRAMEF18Q5VWM3 479 aa13.23□□□□□ -0.29
RNF41-203ENST00000547967 DYMQ7RTS9 669 aa13.23□□□□□ -0.29
RNF41-203ENST00000547967 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
RNF41-203ENST00000547967 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
RNF41-203ENST00000547967 TRMT1Q9NXH9 659 aaKnown RBP13.23□□□□□ -0.29
RNF41-203ENST00000547967 TEX33O43247 280 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 PDIA5Q14554 519 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 ECM1Q16610 540 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 KCNK18Q7Z418 384 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 CUEDC2Q9H467 287 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 BLOC1S4Q9NUP1 217 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
RNF41-203ENST00000547967 HACL1Q9UJ83 578 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 FER1L6Q2WGJ9 1857 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 USP27XA6NNY8 438 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
RNF41-203ENST00000547967 CCT6AP40227 531 aaKnown RBP13.22□□□□□ -0.29
RNF41-203ENST00000547967 PTGER2P43116 358 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 USP11P51784 963 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
RNF41-203ENST00000547967 PDE4DQ08499 809 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
RNF41-203ENST00000547967 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
RNF41-203ENST00000547967 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
RNF41-203ENST00000547967 FCER1AP12319 257 aa13.21□□□□□ -0.29
RNF41-203ENST00000547967 STAT3P40763 770 aa13.21□□□□□ -0.29
RNF41-203ENST00000547967 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
RNF41-203ENST00000547967 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.29
RNF41-203ENST00000547967 LARP4BQ92615 738 aaKnown RBP13.21□□□□□ -0.29
RNF41-203ENST00000547967 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
RNF41-203ENST00000547967 DEFB129Q9H1M3 183 aa13.21□□□□□ -0.29
RNF41-203ENST00000547967 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.29
RNF41-203ENST00000547967 FAM86B1E9PN63 330 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 RHOBTB3O94955 611 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 MYL1P05976 194 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 FAM86B2P0C5J1 330 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 UBXN2AP68543 259 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 AMPD3Q01432 767 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 STK4Q13043 487 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 AP3B2Q13367 1082 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 TNFAIP1Q13829 316 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 CDKAL1Q5VV42 579 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 ADSSL1Q8N142 457 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 EXOC1Q9NV70 894 aa13.21□□□□□ -0.3
RNF41-203ENST00000547967 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 MYMKA6NI61 221 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 FZD9O00144 591 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNF41-203ENST00000547967 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
RNF41-203ENST00000547967 KCNB1Q14721 858 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 NR1I3Q14994 352 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
RNF41-203ENST00000547967 APTXQ7Z2E3 356 aaKnown RBP13.2□□□□□ -0.3
RNF41-203ENST00000547967 GIMAP8Q8ND71 665 aaPredicted RBP13.2□□□□□ -0.3
RNF41-203ENST00000547967 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 IDEP14735 1019 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 INPP5BP32019 993 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 ZNF76P36508 570 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
RNF41-203ENST00000547967 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 SPECC1LQ69YQ0 1117 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 VPS16Q9H269 839 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 SH2D4AQ9H788 454 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
RNF41-203ENST00000547967 BRCA1P38398 1863 aaKnown RBP13.19□□□□□ -0.3
RNF41-203ENST00000547967 A0A1B0GTH6 734 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 CRYGNQ8WXF5 182 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 FOSP01100 380 aaPredicted RBP13.19□□□□□ -0.3
RNF41-203ENST00000547967 STIM1Q13586 685 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 KRT31Q15323 416 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 RAD54LQ92698 747 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 CCDC47Q96A33 483 aaKnown RBP13.19□□□□□ -0.3
RNF41-203ENST00000547967 NAP1L4Q99733 375 aaKnown RBP13.19□□□□□ -0.3
RNF41-203ENST00000547967 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
RNF41-203ENST00000547967 ADD3Q9UEY8 706 aaKnown RBP13.19□□□□□ -0.3
RNF41-203ENST00000547967 CYP3A7-CYP3A51PA0A087WV96 503 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 POTECB2RU33 542 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 E9PMD0 336 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 PSMA7O14818 248 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 CYP3A7P24462 503 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 SREBF1P36956 1147 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 ARHGAP27Q6ZUM4 889 aa13.18□□□□□ -0.3
RNF41-203ENST00000547967 CPXCR1Q8N123 301 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms