RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 PDGFCQ9NRA1 345 aa12.19□□□□□ -0.46
TUBA1A-204ENST00000547939 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
TUBA1A-204ENST00000547939 RBM8AQ9Y5S9 174 aaKnown RBP12.19□□□□□ -0.46
TUBA1A-204ENST00000547939 ASTN1O14525 1302 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 TRIOO75962 3097 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 ARVCFO00192 962 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 NKRFO15226 690 aaKnown RBP eCLIP12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 TLR3O15455 904 aaKnown RBP12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 ADCY6O43306 1168 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 BEX3Q00994 111 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 DUSP28Q4G0W2 176 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 BMP2KLQ5H9B9 411 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 TMTC2Q8N394 836 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 BADQ92934 168 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 MAD2L2Q9UI95 211 aa12.18□□□□□ -0.46
TUBA1A-204ENST00000547939 TRIM43BA6NCK2 446 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 ZBTB5O15062 677 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 KIAA0355O15063 1070 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 MCM5P33992 734 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 CPT1AP50416 773 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 GRM4Q14833 912 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 SCFD2Q8WU76 684 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 TRIM43Q96BQ3 446 aaPredicted RBP12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 IWS1Q96ST2 819 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 GPHNQ9NQX3 736 aaPredicted RBP12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 MAP3K20Q9NYL2 800 aaKnown RBP12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 PCDHA1Q9Y5I3 950 aa12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 DDX49Q9Y6V7 483 aaKnown RBP12.17□□□□□ -0.46
TUBA1A-204ENST00000547939 RBM47A0AV96 593 aaKnown RBP12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 CTAGE5O15320 804 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 CFBP00751 764 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 EDNRBP24530 442 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 KIF5BP33176 963 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 CDK7P50613 346 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 EPHB4P54760 987 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 FAAP100Q0VG06 881 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 STXBP2Q15833 593 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 NFXL1Q6ZNB6 911 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 ALYREFQ86V81 257 aaKnown RBP12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 SAMD3Q8N6K7 520 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 CTCFLQ8NI51 663 aaPredicted RBP12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 LSG1Q9H089 658 aaKnown RBP12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 C11orf16Q9NQ32 467 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 LRRC37A2A6NM11 1700 aa12.16□□□□□ -0.46
TUBA1A-204ENST00000547939 ZNFX1Q9P2E3 1918 aaKnown RBP12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 SLC27A2O14975 620 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 PRC1O43663 620 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 KPNA6O60684 536 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TIMP1P01033 207 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 NEFLP07196 543 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TXNP10599 105 aaKnown RBP12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 ITGB8P26012 769 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 FPGSQ05932 587 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TROAPQ12815 778 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 STOX1Q6ZVD7 989 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 MB21D2Q8IYB1 491 aaPredicted RBP12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 IGDCC4Q8TDY8 1250 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TMEM87BQ96K49 555 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TAAR1Q96RJ0 339 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 MAP3K14Q99558 947 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 C1QTNF1Q9BXJ1 281 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 EPHX3Q9H6B9 360 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 RIOX1Q9H6W3 641 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 TAF6LQ9Y6J9 622 aa12.15□□□□□ -0.46
TUBA1A-204ENST00000547939 PNMA6FA0A0J9YX94 578 aa12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 EIF3JO75822 258 aaKnown RBP12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 DDAH1O94760 285 aa12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 MYL3P08590 195 aa12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 CALM1P0DP23 149 aa12.14□□□□□ -0.47
TUBA1A-204ENST00000547939 CALM2P0DP24 149 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms