RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 LOC102724159A0A0B4J2E5 919 aa26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 ASB14A6NK59 587 aa26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 SPDYE3A6NKU9 549 aa26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 PWP2Q15269 919 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 ARHGEF16Q5VV41 709 aa26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 REXO1Q8N1G1 1221 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 C8orf76Q96K31 380 aa26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 MPHOSPH6Q99547 160 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 BIN2Q9UBW5 565 aaPredicted RBP26.56■■□□□ 1.84
SMARCD1-203ENST00000547247 B4DLN1 442 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 FOSP01100 380 aaPredicted RBP26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 HMGCRP04035 888 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 HSP90AA1P07900 732 aaKnown RBP26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 CLK2P49760 499 aaKnown RBP26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 FOSBP53539 338 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 BECN1Q14457 450 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 MFSD14CQ5VZR4 134 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 MCTP2Q6DN12 878 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 PXMP2Q9NR77 195 aa26.55■■□□□ 1.84
SMARCD1-203ENST00000547247 AP3B2Q13367 1082 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 SLC9C1Q4G0N8 1177 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 KRT40Q6A162 431 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 BLIDQ8IZY5 108 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 DAGLBQ8NCG7 672 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 SYNGAP1Q96PV0 1343 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 IGHA2P01877 340 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 CYP2C19P33261 490 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 NPY5RQ15761 445 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 ARMCX2Q7L311 632 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 IWS1Q96ST2 819 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 FOXD4L1Q9NU39 408 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 PCDHA6Q9UN73 950 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 PCDHA8Q9Y5H6 950 aa26.54■■□□□ 1.84
SMARCD1-203ENST00000547247 ADAMTS3O15072 1205 aa26.53■■□□□ 1.84
SMARCD1-203ENST00000547247 EIF2AK2P19525 551 aaKnown RBP26.53■■□□□ 1.84
SMARCD1-203ENST00000547247 JAKMIP3Q5VZ66 844 aa26.53■■□□□ 1.84
SMARCD1-203ENST00000547247 BRMS1Q9HCU9 246 aa26.53■■□□□ 1.84
SMARCD1-203ENST00000547247 TMEM260Q9NX78 707 aa26.53■■□□□ 1.84
SMARCD1-203ENST00000547247 MMP1P03956 469 aa26.52■■□□□ 1.84
SMARCD1-203ENST00000547247 FBXO18Q8NFZ0 1043 aa26.52■■□□□ 1.84
SMARCD1-203ENST00000547247 MORC4Q8TE76 937 aa26.52■■□□□ 1.84
SMARCD1-203ENST00000547247 SH3TC2Q8TF17 1288 aa26.52■■□□□ 1.84
SMARCD1-203ENST00000547247 PDCD2LQ9BRP1 358 aa26.52■■□□□ 1.84
SMARCD1-203ENST00000547247 EHMT1Q9H9B1 1298 aa26.52■■□□□ 1.84
SMARCD1-203ENST00000547247 EDNRBP24530 442 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 GUCY1B3Q02153 619 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 PDE4DQ08499 809 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 RASGRP4Q8TDF6 673 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 ANO3Q9BYT9 981 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 FRMPD4Q14CM0 1322 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 RPTORQ8N122 1335 aa26.51■■□□□ 1.83
SMARCD1-203ENST00000547247 SNAI1O95863 264 aaPredicted RBP26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 INHAP05111 366 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 NR3C2P08235 984 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 PGM5Q15124 567 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 PGBD1Q96JS3 809 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 CNPY2Q9Y2B0 182 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 DDX49Q9Y6V7 483 aaKnown RBP26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 KRT2P35908 639 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 UBXN2AP68543 259 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 TRIM32Q13049 653 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 SAFBQ15424 915 aaKnown RBP eCLIP26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 LARP1BQ659C4 914 aaKnown RBP26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 ABHD16BQ9H3Z7 469 aa26.5■■□□□ 1.83
SMARCD1-203ENST00000547247 M0R2N6 131 aa26.49■■□□□ 1.83
SMARCD1-203ENST00000547247 PRKAR2AP13861 404 aaKnown RBP26.49■■□□□ 1.83
SMARCD1-203ENST00000547247 CACNB2Q08289 660 aaPredicted RBP26.49■■□□□ 1.83
SMARCD1-203ENST00000547247 STXBP2Q15833 593 aa26.49■■□□□ 1.83
SMARCD1-203ENST00000547247 MCM3APO60318 1980 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 CCDC85CA6NKD9 419 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 MYCLP12524 364 aaPredicted RBP26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 PDCP20941 246 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 CCND2P30279 289 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 VSIG10LQ86VR7 867 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 DIS3L2Q8IYB7 885 aaKnown RBP26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 IL31RAQ8NI17 732 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 OXER1Q8TDS5 423 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 NRBP1Q9UHY1 535 aa26.48■■□□□ 1.83
SMARCD1-203ENST00000547247 H3BQV1 296 aa26.47■■□□□ 1.83
SMARCD1-203ENST00000547247 PRAMEF19Q5SWL8 479 aa26.47■■□□□ 1.83
SMARCD1-203ENST00000547247 MAP3K21Q5TCX8 1036 aa26.47■■□□□ 1.83
SMARCD1-203ENST00000547247 IFFO2Q5TF58 517 aa26.47■■□□□ 1.83
SMARCD1-203ENST00000547247 SREBF1P36956 1147 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 ANP32AP39687 249 aaKnown RBP26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 ACVR2BQ13705 512 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 PCNX4Q63HM2 1172 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 XRRA1Q6P2D8 792 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 EEPD1Q7L9B9 569 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 KRT25Q7Z3Z0 450 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 SPRYD3Q8NCJ5 442 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 ARMC5Q96C12 935 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 BTBD18B2RXH4 712 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 CAPN15O75808 1086 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 EIF3JO75822 258 aaKnown RBP26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 CYBAP13498 195 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 NR5A1Q13285 461 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 KATNBL1Q9H079 304 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 VTA1Q9NP79 307 aa26.46■■□□□ 1.83
SMARCD1-203ENST00000547247 CCDC194A0A1B0GVG4 234 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms