RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 RAD50Q92878 1312 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 NKRFO15226 690 aaKnown RBP eCLIP10.98□□□□□ -0.65
SSH1-205ENST00000546812 NBNO60934 754 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 EFCAB14O75071 495 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 PRDM1O75626 825 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 MCCP23508 829 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 SLC1A4P43007 532 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 ALDH5A1P51649 535 aaPredicted RBP10.98□□□□□ -0.65
SSH1-205ENST00000546812 BAATQ14032 418 aaPredicted RBP10.98□□□□□ -0.65
SSH1-205ENST00000546812 PTPROQ16827 1216 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 LRRC8DQ7L1W4 858 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 FBXO22Q8NEZ5 403 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 NEDD1Q8NHV4 660 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 CTAGE1Q96RT6 745 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 C17orf80Q9BSJ5 609 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
SSH1-205ENST00000546812 ZNF318Q5VUA4 2279 aa10.98□□□□□ -0.65
SSH1-205ENST00000546812 ZFHX2Q9C0A1 2572 aaPredicted RBP10.98□□□□□ -0.65
SSH1-205ENST00000546812 SCN5AQ14524 2016 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
SSH1-205ENST00000546812 IRS1P35568 1242 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 SNAP25P60880 206 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 RBL2Q08999 1139 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 IKBKEQ14164 716 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 COL19A1Q14993 1142 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 PPP2R5BQ15173 497 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 TCTN1Q2MV58 587 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 TIGD5Q53EQ6 642 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 SESTD1Q86VW0 696 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 SCFD2Q8WU76 684 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 PABPC5Q96DU9 382 aaKnown RBP10.97□□□□□ -0.65
SSH1-205ENST00000546812 CCPG1Q9ULG6 757 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 MYH8P13535 1937 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
SSH1-205ENST00000546812 BAZ2AQ9UIF9 1905 aaKnown RBP10.97□□□□□ -0.65
SSH1-205ENST00000546812 ZDBF2Q9HCK1 2354 aa10.97□□□□□ -0.65
SSH1-205ENST00000546812 CACNA1AO00555 2505 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 ICAM1P05362 532 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 TSPY3P0CV98 308 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 TSPY8P0CW00 308 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 CKBP12277 381 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 PTPN5P54829 565 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 CHMP4BP1P59074 171 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 FOXK2Q01167 660 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 HERC4Q5GLZ8 1057 aaPredicted RBP10.96□□□□□ -0.65
SSH1-205ENST00000546812 TCEAL5Q5H9L2 206 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 RCSD1Q6JBY9 416 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 GDF6Q6KF10 455 aaPredicted RBP10.96□□□□□ -0.65
SSH1-205ENST00000546812 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 BANK1Q8NDB2 785 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 PRSS33Q8NF86 280 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 DHX38Q92620 1227 aaKnown RBP10.96□□□□□ -0.65
SSH1-205ENST00000546812 COPS5Q92905 334 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 CHMP4CQ96CF2 233 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 BCL11AQ9H165 835 aa10.96□□□□□ -0.65
SSH1-205ENST00000546812 C5orf42Q9H799 3197 aa10.96□□□□□ -0.66
SSH1-205ENST00000546812 SCN10AQ9Y5Y9 1956 aa10.96□□□□□ -0.66
SSH1-205ENST00000546812 PLIN4Q96Q06 1357 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 NCK2O43639 380 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 TXNP10599 105 aaKnown RBP10.95□□□□□ -0.66
SSH1-205ENST00000546812 HTRA4P83105 476 aaPredicted RBP10.95□□□□□ -0.66
SSH1-205ENST00000546812 TFAP4Q01664 338 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 PDE4DQ08499 809 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 PKN1Q16512 942 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 IER5LQ5T953 404 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 EP400NLQ6ZTU2 488 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 KCTD1Q719H9 257 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 BMP8AQ7Z5Y6 402 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
SSH1-205ENST00000546812 SAMD11Q96NU1 681 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 PRRX2Q99811 253 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 MUTYHQ9UIF7 546 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 DDX19BQ9UMR2 479 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 CACNA1HO95180 2353 aa10.95□□□□□ -0.66
SSH1-205ENST00000546812 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
SSH1-205ENST00000546812 PTPRZ1P23471 2315 aaPredicted RBP10.95□□□□□ -0.66
SSH1-205ENST00000546812 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 H3BNC9 293 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 NFIBO00712 420 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 RAB11FIP3O75154 756 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 EDNRBP24530 442 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 TDO2P48775 406 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 IRX6P78412 446 aaPredicted RBP10.94□□□□□ -0.66
SSH1-205ENST00000546812 SMAD2Q15796 467 aaKnown RBP10.94□□□□□ -0.66
SSH1-205ENST00000546812 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
SSH1-205ENST00000546812 KAT2BQ92831 832 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 EDAQ92838 391 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 MPHOSPH6Q99547 160 aaKnown RBP10.94□□□□□ -0.66
SSH1-205ENST00000546812 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
SSH1-205ENST00000546812 NSUN3Q9H649 340 aaKnown RBP10.94□□□□□ -0.66
SSH1-205ENST00000546812 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
SSH1-205ENST00000546812 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
SSH1-205ENST00000546812 AMHP03971 560 aa10.93□□□□□ -0.66
SSH1-205ENST00000546812 GNAT2P19087 354 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms