RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 TMEM232C9JQI7 657 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 SH2B2O14492 632 aaPredicted RBP15.58■□□□□ 0.08
RAB5B-203ENST00000546810 ADCY6O43306 1168 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 PDHBP11177 359 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 CASTP20810 708 aaKnown RBP15.58■□□□□ 0.08
RAB5B-203ENST00000546810 LIFRP42702 1097 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 CCL23P55773 120 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 EXOSC10Q01780 885 aaKnown RBP15.58■□□□□ 0.08
RAB5B-203ENST00000546810 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 SYNE3Q6ZMZ3 975 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 PRPF38AQ8NAV1 312 aaKnown RBP15.58■□□□□ 0.08
RAB5B-203ENST00000546810 HLA-CQ95604 372 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 SLF1Q9BQI6 1058 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 CYP46A1Q9Y6A2 500 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 GBF1Q92538 1859 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 MUC6Q6W4X9 2439 aa15.58■□□□□ 0.08
RAB5B-203ENST00000546810 PI4K2BG5E9Z4 385 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 PLA2G6O60733 806 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 FDX1P10109 184 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 ATP2A2P16615 1042 aaKnown RBP15.57■□□□□ 0.08
RAB5B-203ENST00000546810 RPS6KB1P23443 525 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 ASPRV1Q53RT3 343 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 KCTD1Q719H9 257 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 RPUSD2Q8IZ73 545 aaKnown RBP15.57■□□□□ 0.08
RAB5B-203ENST00000546810 REPS2Q8NFH8 660 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 CERS4Q9HA82 394 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 PPP1R9AQ9ULJ8 1098 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 REV3LO60673 3130 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 LRRC37A2A6NM11 1700 aa15.57■□□□□ 0.08
RAB5B-203ENST00000546810 ZBED4O75132 1171 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CA3P07451 260 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 PARP1P09874 1014 aaKnown RBP15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CALM1P0DP23 149 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CALM2P0DP24 149 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CALM3P0DP25 149 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 SNHG28P0DPA3 235 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 MRE11P49959 708 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 ZNF543Q08ER8 600 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CCDC144BQ3MJ40 725 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 KRT40Q6A162 431 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 RUFY3Q7L099 469 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 SLC43A3Q8NBI5 491 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 KIFC2Q96AC6 838 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CHMP4CQ96CF2 233 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 SNX27Q96L92 541 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 LRRC2Q9BYS8 371 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 ZSWIM6Q9HCJ5 1215 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 GPCPD1Q9NPB8 672 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
RAB5B-203ENST00000546810 SLC12A7Q9Y666 1083 aa15.56■□□□□ 0.08
RAB5B-203ENST00000546810 PRRC2BQ5JSZ5 2229 aaKnown RBP15.55■□□□□ 0.08
RAB5B-203ENST00000546810 FRMPD2Q68DX3 1309 aaPredicted RBP15.55■□□□□ 0.08
RAB5B-203ENST00000546810 DNAJC25-GNG10A0A024R161 153 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 EPOPA6NHQ4 379 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 CTAGE5O15320 804 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 DDAH1O94760 285 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 KIF5BP33176 963 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 ZNF467Q7Z7K2 595 aaPredicted RBP15.55■□□□□ 0.08
RAB5B-203ENST00000546810 SGMS1Q86VZ5 419 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 MAP3K14Q99558 947 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 NOC4LQ9BVI4 516 aaKnown RBP15.55■□□□□ 0.08
RAB5B-203ENST00000546810 C22orf23Q9BZE7 217 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 WNT8AQ9H1J5 351 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 ABHD16BQ9H3Z7 469 aa15.55■□□□□ 0.08
RAB5B-203ENST00000546810 PRR33A8MZF0 331 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 NKX3-2P78367 333 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 BEX3Q00994 111 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 ITGA7Q13683 1181 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 SNRNP48Q6IEG0 339 aaKnown RBP15.54■□□□□ 0.08
RAB5B-203ENST00000546810 CXCL17Q6UXB2 119 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 BTNL9Q6UXG8 535 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 Q6ZUG5 572 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 ZNF654Q8IZM8 581 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 CTCFLQ8NI51 663 aaPredicted RBP15.54■□□□□ 0.08
RAB5B-203ENST00000546810 TCEANC2Q96MN5 208 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 TEX13BQ9BXU2 312 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 CD320Q9NPF0 282 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 COL11A1P12107 1806 aaPredicted RBP15.54■□□□□ 0.08
RAB5B-203ENST00000546810 PARP14Q460N5 1801 aa15.54■□□□□ 0.08
RAB5B-203ENST00000546810 CABYRO75952 493 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 CPA1P15085 419 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 GNAQP50148 359 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 TROAPQ12815 778 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 GRM4Q14833 912 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 SYDE2Q5VT97 1194 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 FBXL16Q8N461 479 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 ARNTL2Q8WYA1 636 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 VWCEQ96DN2 955 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 IL17RAQ96F46 866 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 SCLYQ96I15 445 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 BACH2Q9BYV9 841 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 SENP2Q9HC62 589 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 GPHNQ9NQX3 736 aaPredicted RBP15.53■□□□□ 0.08
RAB5B-203ENST00000546810 PDRG1Q9NUG6 133 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 PNMA2Q9UL42 364 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
RAB5B-203ENST00000546810 DHX16O60231 1041 aaKnown RBP15.52■□□□□ 0.08
RAB5B-203ENST00000546810 B4GALT4O60513 344 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms