RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 NEDD4P46934 1319 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 MYOM1P52179 1685 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 TNNC2P02585 160 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 LONRF3Q496Y0 759 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 TYW1BQ6NUM6 668 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 ILDR1Q86SU0 546 aaPredicted RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 DCAF4Q8WV16 495 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 HERC5Q9UII4 1024 aaKnown RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 TLDC2A0PJX2 215 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 ERICH4A6NGS2 130 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L15C9J2P7 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L13C9JLJ4 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L11C9JVI0 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L18D6R9N7 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 CCND2P30279 289 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 ADKP55263 362 aaKnown RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 CBX1P83916 185 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 USP17L6PQ6QN14 398 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 RAVER2Q9HCJ3 691 aaKnown RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 TXNDC16Q9P2K2 825 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 TFDP1Q14186 410 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 PRPF38AQ8NAV1 312 aaKnown RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 LSM14BQ9BX40 385 aaKnown RBP13.04□□□□□ -0.32
CHERP-203ENST00000546361 C1orf112Q9NSG2 853 aa13.04□□□□□ -0.32
CHERP-203ENST00000546361 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 MIS18BP1Q6P0N0 1132 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 RSPH3Q86UC2 560 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 FAM107BQ9H098 131 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 MYO1AQ9UBC5 1043 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 MTRF1LQ9UGC7 380 aaKnown RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 AKR1B1P15121 316 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 CLCN1P35523 988 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 ARL1P40616 181 aaPredicted RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 LRRC41Q15345 812 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 PSMB7Q99436 277 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 NAP1L3Q99457 506 aaPredicted RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 NR2F2P24468 414 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 TUBB4BP68371 445 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 SNRNP48Q6IEG0 339 aaKnown RBP13.03□□□□□ -0.32
CHERP-203ENST00000546361 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
CHERP-203ENST00000546361 LPXNO60711 386 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 TOB2Q14106 344 aaPredicted RBP13.02□□□□□ -0.32
CHERP-203ENST00000546361 SECISBP2LQ93073 1101 aaKnown RBP13.02□□□□□ -0.32
CHERP-203ENST00000546361 STK17AQ9UEE5 414 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 IQSEC2Q5JU85 1478 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 DPEP1P16444 411 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 UBL4BQ8N7F7 174 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.32
CHERP-203ENST00000546361 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 RNF146Q9NTX7 359 aa13.02□□□□□ -0.32
CHERP-203ENST00000546361 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 NCOA3Q9Y6Q9 1424 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 ABCB4P21439 1286 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 FKBP3Q00688 224 aaKnown RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 INTS5Q6P9B9 1019 aaKnown RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 MB21D2Q8IYB1 491 aaPredicted RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 EPSTI1Q96J88 318 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 NAPGQ99747 312 aaPredicted RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 BHMT2Q9H2M3 363 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 CEP104O60308 925 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 ZNF365Q70YC5 407 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 SMYD4Q8IYR2 804 aaPredicted RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 CCDC26Q8TAB7 109 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
CHERP-203ENST00000546361 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
CHERP-203ENST00000546361 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
CHERP-203ENST00000546361 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
CHERP-203ENST00000546361 U2AF1L4Q8WU68 220 aaKnown RBP13.01□□□□□ -0.33
CHERP-203ENST00000546361 FAM169AQ9Y6X4 670 aa13.01□□□□□ -0.33
CHERP-203ENST00000546361 DYNC1I1O14576 645 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms