RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 NFIAQ12857 509 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 TTC39BQ5VTQ0 682 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 XKR5Q6UX68 686 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 KSR2Q6VAB6 950 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 GADL1Q6ZQY3 521 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 DHX32Q7L7V1 743 aaKnown RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 ZNF438Q7Z4V0 828 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 CCDC84Q86UT8 332 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 SMCR8Q8TEV9 937 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 TEKT1Q969V4 418 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 COA7Q96BR5 231 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 FAM84BQ96KN1 310 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 DNAJB12Q9NXW2 375 aaKnown RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 AFG3L2Q9Y4W6 797 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 PRRC2BQ5JSZ5 2229 aaKnown RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 WDFY4Q6ZS81 3184 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 ELL2O00472 640 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-205ENST00000546345 NDUFB5O43674 189 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 PTPRAP18433 802 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 FOXO4P98177 505 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 GCKRQ14397 625 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 C8orf58Q8NAV2 365 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 ASB2Q96Q27 587 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 UHRF1Q96T88 793 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-205ENST00000546345 MDFIQ99750 246 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 AGTPBP1Q9UPW5 1226 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 TRANK1O15050 2925 aa8.32□□□□□ -1.08
CCDC60-205ENST00000546345 ANKRD18BA2A2Z9 1011 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 PEX10O60683 326 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 EPHB4P54760 987 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 MARSP56192 900 aaKnown RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 RTP1P59025 263 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 CCL14Q16627 93 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 CHSY3Q70JA7 882 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 G2E3Q7L622 706 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 FASTKD5Q7L8L6 764 aaKnown RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 ZFPM1Q8IX07 1006 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 FAM151AQ8WW52 585 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 ATXN2LQ8WWM7 1075 aaKnown RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 LBHD1Q9BQE6 289 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 PNNQ9H307 717 aaKnown RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 ABI2Q9NYB9 513 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 TMOD2Q9NZR1 351 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 THEGQ9P2T0 379 aa8.31□□□□□ -1.08
CCDC60-205ENST00000546345 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
CCDC60-205ENST00000546345 A6NHS1 94 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 CYP2B6P20813 491 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 HIBADHP31937 336 aaKnown RBP8.3□□□□□ -1.08
CCDC60-205ENST00000546345 NRLP54845 237 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 PLAURQ03405 335 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 TCP10Q12799 353 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 EPHA10Q5JZY3 1008 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 GJD3Q8N144 294 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 TSPYL6Q8N831 410 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 USP6NLQ92738 828 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 PDLIM7Q9NR12 457 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 SLC6A14Q9UN76 642 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 ZHX2Q9Y6X8 837 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 COL11A1P12107 1806 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-205ENST00000546345 PTPRSQ13332 1948 aa8.3□□□□□ -1.08
CCDC60-205ENST00000546345 TRIM75PA6NK02 468 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 ZBTB42B2RXF5 422 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 ITGB8P26012 769 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 SOX18P35713 384 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 GPLD1P80108 840 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 CHAF1AQ13111 956 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-205ENST00000546345 KANK3Q6NY19 840 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 CDC42EP5Q6NZY7 148 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 HHIPL2Q6UWX4 724 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 FBXO33Q7Z6M2 555 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 OR13H1Q8NG92 308 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 BADQ92934 168 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 TMEM63CQ9P1W3 806 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 MORF4L1Q9UBU8 362 aa8.29□□□□□ -1.08
CCDC60-205ENST00000546345 TRIM43BA6NCK2 446 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 PLIN1O60240 522 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 XRCC5P13010 732 aaKnown RBP8.28□□□□□ -1.08
CCDC60-205ENST00000546345 NEXNQ0ZGT2 675 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 IFIT5Q13325 482 aaKnown RBP8.28□□□□□ -1.08
CCDC60-205ENST00000546345 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 ADGRE1Q14246 886 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 SNX17Q15036 470 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 FAM35AQ86V20 835 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 ALYREFQ86V81 257 aaKnown RBP8.28□□□□□ -1.08
CCDC60-205ENST00000546345 TRIM43Q96BQ3 446 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-205ENST00000546345 MRIQ9BWK5 157 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 C1QTNF1Q9BXJ1 281 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 PUS3Q9BZE2 481 aaKnown RBP8.28□□□□□ -1.08
CCDC60-205ENST00000546345 SENP6Q9GZR1 1112 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-205ENST00000546345 EPHX3Q9H6B9 360 aa8.28□□□□□ -1.08
CCDC60-205ENST00000546345 TXNRD2Q9NNW7 524 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms