RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMEM179Q6ZVK1 233 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 OPTNQ96CV9 577 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 CCDC17Q96LX7 622 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 MKNK2Q9HBH9 465 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 ENAMQ9NRM1 1142 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 TOMM22Q9NS69 142 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 GINM1Q9NU53 330 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 TACC3Q9Y6A5 838 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 TSPY2A6NKD2 308 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 RANBP6O60518 1105 aaKnown RBP7.46□□□□□ -1.22
PRKDC-211ENST00000546304 FGRP09769 529 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 FAM157BP0CG42 384 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 TSPY3P0CV98 308 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 TSPY8P0CW00 308 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 ZBTB48P10074 688 aaPredicted RBP7.46□□□□□ -1.22
PRKDC-211ENST00000546304 PTPRAP18433 802 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 MCCP23508 829 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 HSPA4P34932 840 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 NT5C2P49902 561 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
PRKDC-211ENST00000546304 JAG1P78504 1218 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 ICA1Q05084 483 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 TNP2Q05952 138 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 DPYDQ12882 1025 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 GRM1Q13255 1194 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 PPIL2Q13356 520 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 RAB3GAP1Q15042 981 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 NECTIN1Q15223 517 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 CYP4F22Q6NT55 531 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 STOX1Q6ZVD7 989 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 RALYLQ86SE5 291 aaKnown RBP7.46□□□□□ -1.22
PRKDC-211ENST00000546304 CCDC84Q86UT8 332 aaPredicted RBP7.46□□□□□ -1.22
PRKDC-211ENST00000546304 ERO1BQ86YB8 467 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 CLEC10AQ8IUN9 316 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 ESR2Q92731 530 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 WNK4Q96J92 1243 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 CAPNS2Q96L46 248 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 FEZ1Q99689 392 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 OXCT2Q9BYC2 517 aaPredicted RBP7.46□□□□□ -1.22
PRKDC-211ENST00000546304 CNNM2Q9H8M5 875 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 CABP5Q9NP86 173 aa7.46□□□□□ -1.22
PRKDC-211ENST00000546304 IGKV6D-41A0A0C4DH26 115 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 TRIM75PA6NK02 468 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 B4E1Z4 1266 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 E7EWF7 191 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 ZKSCAN1P17029 563 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-211ENST00000546304 GUCY1A2P33402 732 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 ECE1P42892 770 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 PPATQ06203 517 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 KCNMA1Q12791 1236 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 TRDNQ13061 729 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 KRT32Q14532 448 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 SEPT2Q15019 361 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 DEFB115Q30KQ5 88 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 SH3PXD2AQ5TCZ1 1133 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 ZNF444Q8N0Y2 327 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-211ENST00000546304 NEDD1Q8NHV4 660 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 CEP95Q96GE4 821 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 KRT23Q9C075 422 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 AS3MTQ9HBK9 375 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 INCENPQ9NQS7 918 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 GDF2Q9UK05 429 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-211ENST00000546304 ZHX2Q9Y6X8 837 aa7.45□□□□□ -1.22
PRKDC-211ENST00000546304 MYH6P13533 1939 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 RLFQ13129 1914 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 COL11A1P12107 1806 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-211ENST00000546304 FAM155AB1AL88 458 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-211ENST00000546304 C2CD2LO14523 706 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 EFSO43281 561 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 OIP5O43482 229 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 NMT2O60551 498 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 MAPTP10636 758 aaKnown RBP7.44□□□□□ -1.22
PRKDC-211ENST00000546304 BMP4P12644 408 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 CTBSQ01459 385 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 TFAP4Q01664 338 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 NOGQ13253 232 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 SNAPC2Q13487 334 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 IQCA1Q86XH1 822 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 MB21D2Q8IYB1 491 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-211ENST00000546304 LRRC47Q8N1G4 583 aaKnown RBP7.44□□□□□ -1.22
PRKDC-211ENST00000546304 ZNF280CQ8ND82 737 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 NCOA7Q8NI08 942 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 KCNB2Q92953 911 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 UBAC1Q9BSL1 405 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 WDR18Q9BV38 432 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 C2orf49Q9BVC5 232 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-211ENST00000546304 USP26Q9BXU7 913 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 SH2D4AQ9H788 454 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 KANSL2Q9H9L4 492 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 HCN2Q9UL51 889 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 KCNH4Q9UQ05 1017 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 TNKSO95271 1327 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 HTTP42858 3142 aa7.44□□□□□ -1.22
PRKDC-211ENST00000546304 A0A0G2JLL6 359 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms