RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 ZHX3Q9H4I2 956 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 TXLNGQ9NUQ3 528 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 ANGEL1Q9UNK9 670 aaKnown RBP11.33□□□□□ -0.6
SOD2-216ENST00000546260 SLC4A7Q9Y6M7 1214 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 TRIM49BA6NDI0 452 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 HERVK_113P62684 666 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 TXNDC2Q86VQ3 553 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 GALNT15Q8N3T1 639 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 CASKIN2Q8WXE0 1202 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
SOD2-216ENST00000546260 GSDMAQ96QA5 445 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 GGA2Q9UJY4 613 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 NVLO15381 856 aaKnown RBP11.33□□□□□ -0.6
SOD2-216ENST00000546260 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
SOD2-216ENST00000546260 MCM7P33993 719 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 TIMM10P62072 90 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 ITGB3BPQ13352 177 aaPredicted RBP11.33□□□□□ -0.6
SOD2-216ENST00000546260 TNNI3KQ59H18 835 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.33□□□□□ -0.6
SOD2-216ENST00000546260 DTX3LQ8TDB6 740 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 PIDD1Q9HB75 910 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 PCDHB6Q9Y5E3 794 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
SOD2-216ENST00000546260 CAPN6Q9Y6Q1 641 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 FPGT-TNNI3KV9GXZ4 949 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 hCG_1642624A0A1W2PR95 340 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 H7C1D1 291 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 M0R2C6 588 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 MAP3K7O43318 606 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 BMP6P22004 513 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 ASIC1P78348 528 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 KCTD19Q17RG1 926 aaPredicted RBP11.32□□□□□ -0.6
SOD2-216ENST00000546260 PHLDB3Q6NSJ2 640 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 DNAAF2Q9NVR5 837 aaKnown RBP11.32□□□□□ -0.6
SOD2-216ENST00000546260 GDAQ9Y2T3 454 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 UBN2Q6ZU65 1347 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SASH1O94885 1247 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SERPINB3P29508 390 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 PLTPP55058 493 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SH3BGRP55822 239 aaPredicted RBP11.32□□□□□ -0.6
SOD2-216ENST00000546260 COPS2P61201 443 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 ZBED6P86452 979 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 GRIN1Q05586 938 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 NR5A1Q13285 461 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SLC9C1Q4G0N8 1177 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 ACSBG1Q96GR2 724 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 KRT23Q9C075 422 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 HELLSQ9NRZ9 838 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 MYL1P05976 194 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SPRED3Q2MJR0 410 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 SLC44A4Q53GD3 710 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 LCA5Q86VQ0 697 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 KIFAP3Q92845 792 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 PAGE5Q96GU1 130 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
SOD2-216ENST00000546260 NDNQ99608 321 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
SOD2-216ENST00000546260 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.32□□□□□ -0.6
SOD2-216ENST00000546260 DDX47Q9H0S4 455 aaKnown RBP11.32□□□□□ -0.6
SOD2-216ENST00000546260 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 FGFR1OP2Q9NVK5 253 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 PPP1R9AQ9ULJ8 1098 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
SOD2-216ENST00000546260 GSTA1P08263 222 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 SLC5A9Q2M3M2 681 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 TBC1D25Q3MII6 688 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 SPATA24Q86W54 205 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 DSCC1Q9BVC3 393 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 CLTCL1P53675 1640 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 TCP11X1B4DZS4 312 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 DAPK3O43293 454 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 ORC4O43929 436 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 VPS41P49754 854 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 SMC6Q96SB8 1091 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 EBF2Q9HAK2 575 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 RAD51CO43502 376 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 PALMO75781 387 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 CACNA2D1P54289 1103 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 CUL4BQ13620 913 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 CYTH2Q99418 400 aa11.31□□□□□ -0.6
SOD2-216ENST00000546260 USP15Q9Y4E8 981 aaPredicted RBP11.31□□□□□ -0.6
SOD2-216ENST00000546260 SEMA3EO15041 775 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms